Factsheet for Zm00001d018617_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95722	Sorghum	cytosol	85.59	84.64
Os07t0103500-01	Rice	cytosol	62.15	64.52
Zm00001d017294_P001	Maize	cytosol	49.72	48.75
PGSC0003DMT400068810	Potato	cytosol	45.76	48.65
Zm00001d002999_P001	Maize	cytosol, peroxisome, plastid	49.15	48.07
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	46.61	47.97
KRH29245	Soybean	cytosol	45.76	47.93
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	48.59	47.38
Solyc04g008670.1.1	Tomato	golgi	45.76	45.38
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	45.76	40.0
Zm00001d035994_P001	Maize	cytosol	27.68	29.17

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	UniProt:A0A1D6HQQ6	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	ProteinID:ONM50894.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF250	SUPFAM:SSF51197	UniParc:UPI000844D6FE
EnsemblPlantsGene:Zm00001d018617	EnsemblPlants:Zm00001d018617_P001	EnsemblPlants:Zm00001d018617_T001	SEG:seg	:	:

Description

gibberellin 2-oxidase12 gibberellin 2-oxidase12

Coordinates

chr7:+:1105512..1106576

Molecular Weight (calculated)

39157.3 Da

IEP (calculated)

6.640

GRAVY (calculated)

-0.296

Length

354 amino acids

Sequence
(BLAST)

001: MAMEEDDDYE PPLMATYKHL LDSHPHRQLG AGAAQDDEDC FLLPVIDLSS LLPPVHHRKQ SSSAAAAEQC RASIVRAASE WGFFQVTNHG VPQVLLDELH
101: QAQAGVFRRP FQLKAHQPLL DFSPESYRWG TPTATCLEQL SWSEAYHIPT TTTTTGNDDK TRLVVEEVST AMSKLAQRLA GILVAELGED SAAAVVSRCT
201: RSTCFLRLNR YPPCAAAASG VVYGLCPHSD SDFLTILHQD GVGGLQLVKD GQWVAVKPSP GALIVNVGDL LQAWSNDRYR SVEHRVMASA TRERFSAAFF
301: LCPSYDTLIR PRCGAGGPPP RYESFTFGEY RNQIREDVRL TGRKLGLQRF RKAE

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.