Factsheet for Zm00001d017294_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30679	Sorghum	cytosol	88.37	83.51
TraesCS6A01G221900.1	Wheat	cytosol	77.29	80.4
TraesCS6B01G259200.1	Wheat	cytosol	77.29	80.4
TraesCS6D01G213100.1	Wheat	cytosol	77.01	80.12
Os02t0630300-01	Rice	cytosol	59.83	72.24
Zm00001d002999_P001	Maize	cytosol, peroxisome, plastid	65.1	64.92
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	58.45	61.34
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	59.0	58.68
PGSC0003DMT400068810	Potato	cytosol	52.91	57.36
KRH29245	Soybean	cytosol	52.08	55.62
Solyc04g008670.1.1	Tomato	golgi	51.8	52.38
Zm00001d018617_P001	Maize	cytosol	48.75	49.72
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	52.08	46.42
Zm00001d035994_P001	Maize	cytosol	30.75	33.04

Protein Annotations

EntrezGene:103627438	Gene3D:2.60.120.330	MapMan:50.1.13	UniProt:A0A1D6HDP2	ProteinID:AQK72799.1	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF177	SUPFAM:SSF51197
UniParc:UPI000221BC94	EnsemblPlantsGene:Zm00001d017294	EnsemblPlants:Zm00001d017294_P001	EnsemblPlants:Zm00001d017294_T001	SEG:seg	:

Description

gibberellin 2-oxidase4 gibberellin 2-oxidase4

Coordinates

chr5:-:192007580..192011428

Molecular Weight (calculated)

39409.5 Da

IEP (calculated)

4.842

GRAVY (calculated)

-0.275

Length

361 amino acids

Sequence
(BLAST)

001: MPAFAGGAAE PPLADSYYAL LRRGNDDEGA YTTSTAPWDD VSLPVAECEL PMIDVGCLTT ADDGSSPEAE AERAACAAAI ARAAEEWGFF QVRNHGVPQE
101: LLEEMRREQA RLFRLPFETK ATAGLLNDSY RWGTPTATSP RQLSWSEAFH VPLAGVSGSG TTCDFGDLTT LRDVTREVAG AMSKLAGTLA RVLAEALLGR
201: RPAGERFPEG CDETTCFLRL NRYPACPISP GALGLVPHTD SDFLTVLCQD QQVGGLQLMK GDSWVAVKPI PGTLVVNIGD LFQAWSNNRY KSVEHKVMTN
301: ARTERYSVAY FLCPSYDSPI GTCEEPSLYR TFTFGEYRRK VQEDVKRTGK KVGLPNFLAQ T

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.