Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g008670.1.1 | Tomato | golgi | 93.69 | 87.39 |
| KRH29245 | Soybean | cytosol | 66.07 | 65.09 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 62.76 | 60.76 |
| VIT_01s0010g01650.t01 | Wine grape | cytosol, nucleus, peroxisome | 66.07 | 60.61 |
| GSMUA_Achr9P21260_001 | Banana | cytosol | 57.36 | 57.7 |
| TraesCS6A01G221900.1 | Wheat | cytosol | 57.66 | 55.33 |
| TraesCS6B01G259200.1 | Wheat | cytosol | 57.36 | 55.04 |
| TraesCS6D01G213100.1 | Wheat | cytosol | 57.06 | 54.76 |
| HORVU4Hr1G072540.2 | Barley | mitochondrion | 51.35 | 53.94 |
| KRH24233 | Soybean | endoplasmic reticulum, golgi, vacuole | 65.47 | 53.83 |
| PGSC0003DMT400029280 | Potato | cytosol | 54.35 | 53.71 |
| Zm00001d017294_P001 | Maize | cytosol | 57.36 | 52.91 |
| PGSC0003DMT400005250 | Potato | cytosol, nucleus, peroxisome | 56.16 | 52.09 |
| TraesCS2D01G375300.1 | Wheat | cytosol | 55.56 | 51.39 |
| TraesCS4B01G376100.1 | Wheat | cytosol | 52.85 | 51.31 |
| TraesCS2A01G379000.1 | Wheat | cytosol | 55.56 | 50.96 |
| KXG30679 | Sorghum | cytosol | 58.26 | 50.79 |
| TraesCS2B01G396000.1 | Wheat | cytosol | 55.26 | 50.69 |
| Zm00001d002999_P001 | Maize | cytosol, peroxisome, plastid | 54.65 | 50.28 |
| TraesCS4B01G272100.1 | Wheat | cytosol, peroxisome, plastid | 54.65 | 49.73 |
| KXG26736 | Sorghum | cytosol, peroxisome, plastid | 54.95 | 49.46 |
| TraesCS4B01G376200.1 | Wheat | cytosol | 52.55 | 49.44 |
| TraesCS4D01G271300.1 | Wheat | cytosol, nucleus, peroxisome | 54.35 | 49.32 |
| Os04t0522500-01 | Rice | cytosol | 52.85 | 49.16 |
| TraesCS4A01G033200.1 | Wheat | cytosol, nucleus, peroxisome | 53.75 | 48.77 |
| Os07t0103500-01 | Rice | cytosol | 49.55 | 48.39 |
| Os02t0630300-01 | Rice | cytosol | 42.64 | 47.49 |
| TraesCS5A01G543100.1 | Wheat | cytosol | 50.75 | 47.34 |
| EER95722 | Sorghum | cytosol | 49.85 | 46.37 |
| Zm00001d018617_P001 | Maize | cytosol | 48.65 | 45.76 |
| HORVU2Hr1G090030.4 | Barley | peroxisome | 40.54 | 37.6 |
| PGSC0003DMT400078051 | Potato | cytosol | 32.73 | 30.7 |
| PGSC0003DMT400000488 | Potato | cytosol | 29.43 | 30.53 |
| PGSC0003DMT400040854 | Potato | cytosol, plastid | 26.73 | 27.99 |
Protein Annotations
| EntrezGene:102604674 | Gene3D:2.60.120.330 | MapMan:50.1.13 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 |
| InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | UniProt:M1CJI9 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 |
| PFAM:PF14226 | EnsemblPlantsGene:PGSC0003DMG400026762 | PGSC:PGSC0003DMG400026762 | EnsemblPlants:PGSC0003DMT400068810 | PFscan:PS51471 | PANTHER:PTHR10209 |
| PANTHER:PTHR10209:SF177 | SUPFAM:SSF51197 | UniParc:UPI000295594C | RefSeq:XP_006360865.1 | : | : |
Description
Gibberellin 20-oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400026762]
Coordinates
chr4:+:3796121..3799518
Molecular Weight (calculated)
38189.9 Da
IEP (calculated)
6.780
GRAVY (calculated)
-0.321
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MMIESWNPPL LHDYSKLSRL QSNCDRSNDV LMMEELELPM IDLNGLKSGD EREMVRCENA IAKASSEWGF FQVVNHGVSL DLLRKMRKEQ MKLFKAPFEM
101: KATCGLLNNS YRWGNSTATC PKQFNWSEAF HIPLTKISEA ASYGEFTTLR EVMVEYATSM QDLAKSLASV LVRKLDHKDS EIGEIFNENS CFLRLNHYPS
201: CQISQEIFGL VPHTDSDFLT ILHQDEVGGL QLMKDSKWVA VKPNQNALIV NIGDLFQAWS NDVYKSVEHK VMANGKKERF SIAYFLCPSY DSIIGSCKEP
301: SIYKKFTFGE YRYQIQQDVK LIGHKVGLSR FLQ
101: KATCGLLNNS YRWGNSTATC PKQFNWSEAF HIPLTKISEA ASYGEFTTLR EVMVEYATSM QDLAKSLASV LVRKLDHKDS EIGEIFNENS CFLRLNHYPS
201: CQISQEIFGL VPHTDSDFLT ILHQDEVGGL QLMKDSKWVA VKPNQNALIV NIGDLFQAWS NDVYKSVEHK VMANGKKERF SIAYFLCPSY DSIIGSCKEP
301: SIYKKFTFGE YRYQIQQDVK LIGHKVGLSR FLQ
001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY
Arabidopsis Description
GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.