CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017294_P001	Maize	cytosol	83.51	88.37
TraesCS6B01G259200.1	Wheat	cytosol	73.3	80.69
TraesCS6A01G221900.1	Wheat	cytosol	73.04	80.4
TraesCS6D01G213100.1	Wheat	cytosol	73.04	80.4
Os02t0630300-01	Rice	cytosol	56.02	71.57
KXG26736	Sorghum	cytosol, peroxisome, plastid	64.66	66.76
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	54.97	61.05
PGSC0003DMT400068810	Potato	cytosol	50.79	58.26
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	54.45	57.3
KRH29245	Soybean	cytosol	50.52	57.1
Solyc04g008670.1.1	Tomato	golgi	50.0	53.5
EER95722	Sorghum	cytosol	47.38	50.56
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	50.26	47.41
OQU85872	Sorghum	cytosol	27.23	29.63

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	UniProt:A0A194YR22	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KXG30679	ProteinID:KXG30679	ProteinID:KXG30679.1
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF177
EnsemblPlantsGene:SORBI_3004G222500	SUPFAM:SSF51197	UniParc:UPI0007F2754C	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:57245524..57250357

Molecular Weight (calculated)

41280.5 Da

IEP (calculated)

5.155

GRAVY (calculated)

-0.318

Length

382 amino acids

Sequence
(BLAST)

001: MPAFAGSAAE PPLADSYYAL LRRRGGGGNN DDEEASGGAY YYDTTSSTVP SSDDDVAECE LPMIDVGCLT TLTRSEHGSS SEAERAACTA AIARAAEEWG
101: FFQVRNHGVS QELLDEMRRE QARLFRLPFE AKATAGLLNH SYRWGTPTAT SPQQLSWSEA FHVPLAGVSG SAAAGTCDFG DLTTLRDVTR EVAGAMSKLA
201: GTLARVLAEE ARPRPCLPAG GGGGGGGERF PEGCDETTCF LRLNRYPPCP IAADAFGLVP HTDSDFLTVL CQDQQVGGLQ LMKGGRWVAV KPIPGALIVN
301: IGDLFQAWSN NRYKSVEHKV MTNAKTERYS VAYFLCPSYD SPIGTCEEPS LYRTFTFGEY RRKVQEDVKR TGKKVGLPNF LV

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.