CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29245	Soybean	cytosol	80.74	96.75
PGSC0003DMT400068810	Potato	cytosol	53.83	65.47
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	52.59	61.92
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	54.81	61.16
Solyc04g008670.1.1	Tomato	golgi	53.83	61.06
GSMUA_Achr9P21260_001	Banana	cytosol	47.16	57.7
TraesCS6D01G213100.1	Wheat	cytosol	48.89	57.06
TraesCS6A01G221900.1	Wheat	cytosol	48.89	57.06
TraesCS6B01G259200.1	Wheat	cytosol	48.64	56.77
KRH27598	Soybean	cytosol, nucleus, peroxisome	44.69	53.39
TraesCS2A01G379000.1	Wheat	cytosol	47.41	52.89
TraesCS2B01G396000.1	Wheat	cytosol	47.41	52.89
TraesCS4B01G376100.1	Wheat	cytosol	44.69	52.77
HORVU4Hr1G072540.2	Barley	mitochondrion	41.23	52.68
TraesCS2D01G375300.1	Wheat	cytosol	46.67	52.5
Zm00001d002999_P001	Maize	cytosol, peroxisome, plastid	46.67	52.21
Zm00001d017294_P001	Maize	cytosol	46.42	52.08
KRH57481	Soybean	cytosol	9.63	52.0
Os04t0522500-01	Rice	cytosol	45.43	51.4
KRH27091	Soybean	cytosol	40.99	51.39
KRH22245	Soybean	cytosol, nucleus, peroxisome	40.25	51.1
KXG26736	Sorghum	cytosol, peroxisome, plastid	46.67	51.08
TraesCS4B01G376200.1	Wheat	cytosol	44.44	50.85
TraesCS5A01G543100.1	Wheat	cytosol	44.69	50.7
KRH57748	Soybean	cytosol, nucleus, peroxisome	40.74	50.61
TraesCS4B01G272100.1	Wheat	cytosol, peroxisome, plastid	45.43	50.27
KXG30679	Sorghum	cytosol	47.41	50.26
TraesCS4D01G271300.1	Wheat	cytosol, nucleus, peroxisome	45.19	49.86
TraesCS4A01G033200.1	Wheat	cytosol, nucleus, peroxisome	44.94	49.59
Os07t0103500-01	Rice	cytosol	41.48	49.27
KRH27095	Soybean	cytosol, nucleus, peroxisome	40.49	48.52
KRH22241	Soybean	cytosol, nucleus, peroxisome	40.25	48.37
Os02t0630300-01	Rice	cytosol	35.56	48.16
KRG91226	Soybean	cytosol, nucleus, peroxisome	42.72	47.27
KRH04670	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.75	46.53
EER95722	Sorghum	cytosol	40.74	46.09
KRH04189	Soybean	cytosol, nucleus, peroxisome	39.51	45.98
Zm00001d018617_P001	Maize	cytosol	40.0	45.76
HORVU2Hr1G090030.4	Barley	peroxisome	33.33	37.6
KRH30278	Soybean	cytosol	28.15	32.11
KRG98268	Soybean	cytosol	27.16	30.99
KRH65048	Soybean	cytosol, nucleus, peroxisome	22.47	28.53
KRH40458	Soybean	cytosol, nucleus, peroxisome	21.73	27.59
KRH40460	Soybean	cytosol	9.14	23.27

Protein Annotations

EntrezGene:100809329	Gene3D:2.60.120.330	MapMan:50.1.13	UniProt:A0A0R0HA10	EMBL:ACUP02007172	InterPro:DIOX_N
EnsemblPlantsGene:GLYMA_12G029800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
EnsemblPlants:KRH24233	ProteinID:KRH24233	ProteinID:KRH24233.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF177	SUPFAM:SSF51197	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000233D491	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:2213765..2217153

Molecular Weight (calculated)

45851.1 Da

IEP (calculated)

6.441

GRAVY (calculated)

-0.114

Length

405 amino acids

Sequence
(BLAST)

001: MACEREFQMA VLLTLVMIWT PMFVLSDCPL QDFLDHSVSI LQFNHINAIQ ISISTSPPYT LFFHFGAIMI DSNPPLMQHY GALVRNSGEA KEATSFNDQN
101: HPLVDACDLP LIDLSGLKSS NERERRACTA AICKAASEWG FFQVVNHGIR HDLLRKMREE QVKLFEVPFE KKVTCGVLNN PYRWGTPTAT RSNQFSWSEA
201: FHIPLTMISE AASWGEFTSL REAINEFAPA MLEVSRLLAS ILAQNLGYPE DALEKLCDAG ACFLRLNHYP CCPKSKDEIF GLVPHTDSDF LTILYQDQVG
301: GLQLMKDSKW VAVKPNPDAL IVNIGDLFQA WSNDEYKSVE HKVVANNKME RYSIAYFLCP SYSTVINGCK GPSVYRKFTF GEYRHQIQED VKKIGHKIGL
401: SRFLL

Best Arabidopsis Sequence Match ( AT1G50960.1 )
(BLAST)

001: MASQPPFKTN FCSIFGSSFP NSTSESNTNT STIQTSGIKL PVIDLSHLTS GEEVKRKRCV KQMVAAAKEW GFFQIVNHGI PKDVFEMMLL EEKKLFDQPF
101: SVKVRERFSD LSKNSYRWGN PSATSPAQYS VSEAFHIILS EVSRISDDRN NLRTIVETYV QEIARVAQMI CEILGKQVNV SSEYFENIFE LENSFLRLNK
201: YHPSVFGSEV FGLVPHTDTS FLTILSQDQI GGLELENNGQ WISVKPCLEA LTVNIGDMFQ ALSNGVYQSV RHRVISPANI ERMSIAFFVC PYLETEIDCF
301: GYPKKYRRFS FREYKEQSEH DVKETGDKVG LSRFLI

Arabidopsis Description

GA2OX7Gibberellin 2-beta-dioxygenase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6I4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.