CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04670	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	91.1	85.84
KRH22245	Soybean	cytosol, nucleus, peroxisome	79.45	81.19
KRH27091	Soybean	cytosol	79.75	80.5
KRH04189	Soybean	cytosol, nucleus, peroxisome	83.74	78.45
KRH57481	Soybean	cytosol	16.56	72.0
KRH22241	Soybean	cytosol, nucleus, peroxisome	66.56	64.39
KRH27095	Soybean	cytosol, nucleus, peroxisome	66.56	64.2
KRH27598	Soybean	cytosol, nucleus, peroxisome	55.52	53.39
VIT_19s0177g00030.t01	Wine grape	vacuole	56.13	49.86
CDY35579	Canola	cytosol, nucleus, peroxisome	38.04	49.8
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	49.69	49.69
KRH29245	Soybean	cytosol	50.31	48.52
KRG91226	Soybean	cytosol, nucleus, peroxisome	53.68	47.81
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	48.16	45.24
AT1G50960.1	Thale cress	plastid	46.63	45.24
VIT_19s0177g00020.t01	Wine grape	plastid	30.67	44.84
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	50.61	40.74
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	46.63	36.36
KRH30278	Soybean	cytosol	34.05	31.27
KRG98268	Soybean	cytosol	33.13	30.42
KRH65048	Soybean	cytosol, nucleus, peroxisome	27.61	28.21
KRH40458	Soybean	cytosol, nucleus, peroxisome	25.77	26.33
CDY35580	Canola	plastid	4.91	25.0
CDY29619	Canola	plastid	44.17	19.59
Bra030461.1-P	Field mustard	plastid	44.17	19.15
KRH40460	Soybean	cytosol	9.2	18.87

Protein Annotations

EntrezGene:100793950	Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:ACUP02002893	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_05G081600
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	UniProt:I1K1R2	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
EnsemblPlants:KRH57748	ProteinID:KRH57748	ProteinID:KRH57748.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF248	SUPFAM:SSF51197	UniParc:UPI000233AA0A	:

Description

hypothetical protein

Coordinates

chr5:-:12225281..12230132

Molecular Weight (calculated)

37624.6 Da

IEP (calculated)

8.647

GRAVY (calculated)

-0.431

Length

326 amino acids

Sequence
(BLAST)

001: MDYEPPFLET YKALVQNHVD DSKNDSSLVE RCELPVIDLG KFNYERDECE KEIAEAANKW GFFQVVNHGI SQELLKSLEF EQKKLFYQPF VNKSAKFNFS
101: SLSAKTYRWG NPFATNLRQL SWSEAFHFYL SDISWMDQHH SMRSSLEAFA SRVFSLAKSL AEILAFNLNT KSNYFRENCL PKSSYIRLNR YPPCPISSKV
201: HGLLPHSDTS FLTIVHQDQV GGLQLMKDGK WVGVKPNPQA LVVNIGDFFQ AFSNGVYKSI KHRVVASEKV ERFSVAFFYC PSEEAVIESH IKPATYRKFT
301: SREYRQQTEK DVKQTGDKVG LSRFLL

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.