CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98268	Soybean	cytosol	87.61	87.61
Bra002628.1-P	Field mustard	cytosol, nucleus, peroxisome	21.41	59.84
CDX80345	Canola	cytosol, nucleus, peroxisome	21.41	59.84
CDY52119	Canola	cytosol, nucleus, peroxisome	21.13	59.06
VIT_06s0004g06790.t01	Wine grape	cytosol	51.55	54.3
CDY32695	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	29.86	51.96
Bra020362.1-P	Field mustard	cytosol	47.61	48.56
AT5G58660.1	Thale cress	cytosol, nucleus, peroxisome	47.89	48.3
PGSC0003DMT400078051	Potato	cytosol	47.04	47.04
Solyc06g082030.2.1	Tomato	cytosol	46.2	46.46
AT3G47190.1	Thale cress	cytosol	41.97	45.02
CDY02826	Canola	cytosol	47.89	44.85
GSMUA_Achr10P...	Banana	mitochondrion	43.94	43.33
Os04t0407800-01	Rice	cytosol, nucleus, peroxisome	38.59	40.77
Zm00001d035994_P001	Maize	cytosol	37.75	39.88
OQU85872	Sorghum	cytosol	37.46	37.89
TraesCS3B01G603000.1	Wheat	cytosol	34.65	37.61
HORVU3Hr1G117870.1	Barley	cytosol	34.08	37.58
TraesCS3D01G542800.1	Wheat	cytosol	34.37	36.09
KRH57748	Soybean	cytosol, nucleus, peroxisome	31.27	34.05
KRH29245	Soybean	cytosol	32.39	34.02
KRH27598	Soybean	cytosol, nucleus, peroxisome	32.39	33.92
KRH22245	Soybean	cytosol, nucleus, peroxisome	30.14	33.54
KRH27091	Soybean	cytosol	30.42	33.44
KRH57481	Soybean	cytosol	7.04	33.33
KRH04670	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.55	32.37
KRH22241	Soybean	cytosol, nucleus, peroxisome	30.7	32.34
KRH27095	Soybean	cytosol, nucleus, peroxisome	30.7	32.25
KRH04189	Soybean	cytosol, nucleus, peroxisome	31.55	32.18
KRG91226	Soybean	cytosol, nucleus, peroxisome	30.42	29.51
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	25.35	29.51
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	32.11	28.15
KRH40458	Soybean	cytosol, nucleus, peroxisome	24.23	26.96
KRH65048	Soybean	cytosol, nucleus, peroxisome	23.1	25.71
KRH40460	Soybean	cytosol	9.58	21.38

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:ACUP02006949	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_11G172500	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872
GO:GO:0055114	UniProt:I1LLL6	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KRH30278
ProteinID:KRH30278	ProteinID:KRH30278.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF206	SUPFAM:SSF51197	UniParc:UPI000233C9BC	SEG:seg

Description

hypothetical protein

Coordinates

chr11:-:18740852..18756720

Molecular Weight (calculated)

40392.9 Da

IEP (calculated)

5.887

GRAVY (calculated)

-0.505

Length

355 amino acids

Sequence
(BLAST)

001: MIDLYIFNLP TNNNNNNNMN NIESYPPVLR HLDHHQLPPP PNPDPDKDPT QQDSDPIPII DFSCLNHDKS KLDEACKDWG FFRLVNHGIP MTLLKKLQEV
101: AKELFSLSFE AKEGACSGSP VSYFWGTPAL TPSGTTTRGP QNMNWVEGFD VPLSQLPHFN PHQLPTLESI RLPIKDYKTH LSRIATTLFE AMAKNLDLSL
201: KPSEPYLAEN TGMVRVYRYP NCSDANVGWG MEAHTDSSVL SILNQDDEVS GLQVLKDDQW LTVKPIPNTL IVNLGDMMQA ISDDRYKSVT HRVSINKHKE
301: RISICYFVFP GEDVAIESYK YKPFTYNEFR AQVQQDIKAL GYKVGLSRFQ HHEEC

Best Arabidopsis Sequence Match ( AT5G58660.1 )
(BLAST)

001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.