Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002628.1-P | Field mustard | cytosol, nucleus, peroxisome | 22.26 | 59.06 |
| CDY52119 | Canola | cytosol, nucleus, peroxisome | 21.66 | 57.48 |
| CDX80345 | Canola | cytosol, nucleus, peroxisome | 20.77 | 55.12 |
| KRG98268 | Soybean | cytosol | 54.9 | 52.11 |
| KRH30278 | Soybean | cytosol | 54.3 | 51.55 |
| CDY32695 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole | 30.56 | 50.49 |
| Bra020362.1-P | Field mustard | cytosol | 48.96 | 47.41 |
| AT5G58660.1 | Thale cress | cytosol, nucleus, peroxisome | 49.26 | 47.16 |
| PGSC0003DMT400078051 | Potato | cytosol | 47.18 | 44.79 |
| Solyc06g082030.2.1 | Tomato | cytosol | 46.59 | 44.48 |
| CDY02826 | Canola | cytosol | 48.37 | 43.01 |
| AT3G47190.1 | Thale cress | cytosol | 42.14 | 42.9 |
| GSMUA_Achr10P... | Banana | mitochondrion | 45.4 | 42.5 |
| Zm00001d035994_P001 | Maize | cytosol | 42.14 | 42.26 |
| TraesCS3B01G603000.1 | Wheat | cytosol | 40.06 | 41.28 |
| Os04t0407800-01 | Rice | cytosol, nucleus, peroxisome | 40.95 | 41.07 |
| HORVU3Hr1G117870.1 | Barley | cytosol | 38.58 | 40.37 |
| TraesCS3D01G542800.1 | Wheat | cytosol | 39.76 | 39.65 |
| OQU85872 | Sorghum | cytosol | 40.65 | 39.03 |
| TraesCS3A01G537300.2 | Wheat | cytosol, nucleus, peroxisome | 29.38 | 32.46 |
| VIT_01s0010g01650.t01 | Wine grape | cytosol, nucleus, peroxisome | 34.72 | 32.23 |
| VIT_19s0177g00030.t01 | Wine grape | vacuole | 34.12 | 31.34 |
| VIT_10s0116g00410.t01 | Wine grape | cytosol, nucleus, peroxisome | 31.45 | 30.81 |
| VIT_19s0177g00020.t01 | Wine grape | plastid | 18.69 | 28.25 |
| VIT_16s0050g00640.t01 | Wine grape | nucleus, peroxisome, vacuole | 26.11 | 27.16 |
| VIT_15s0046g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 25.82 | 26.52 |
| VIT_02s0025g03440.t01 | Wine grape | cytosol, nucleus, peroxisome | 25.22 | 26.48 |
Protein Annotations
| EntrezGene:100258725 | wikigene:100258725 | Gene3D:2.60.120.330 | MapMan:50.1.13 | ProteinID:CBI15936 | ProteinID:CBI15936.3 |
| UniProt:D7SJW0 | InterPro:DIOX_N | EMBL:FN594951 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | EntrezGene:LOC100258725 | wikigene:LOC100258725 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 |
| PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF206 | SUPFAM:SSF51197 |
| TIGR:TC60091 | UniParc:UPI00015C796D | ArrayExpress:VIT_06s0004g06790 | EnsemblPlantsGene:VIT_06s0004g06790 | EnsemblPlants:VIT_06s0004g06790.t01 | unigene:Vvi.15928 |
| RefSeq:XP_002277356 | RefSeq:XP_002277356.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6:+:7476208..7478569
Molecular Weight (calculated)
37891.1 Da
IEP (calculated)
5.627
GRAVY (calculated)
-0.354
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGTEVSSYP PLFREEKGSI HGGVEGEEGV KVGGGSSESD PLPVMDLECM EMEKLGEVCR EWGIFRLVNH GIPLSLLSQL EDHAKRLFGL PFESKEAVFT
101: TPVSYFWGTP ALTKSGVALS QTPQNVNWVE GFNVPLSQLP LLQTQDPIIA SFRLILEEYG RHLSRIARTL FEAMAKNLGH DPKQYESSLD ESSGIVRVYR
201: YPLRPNRDHA SHMEVHTDSS VLSILNQDEV GGLEVLKDGE WLSASPISNT LVINVGDMMQ VISNDKYKSV IHRVKVAKER ERLSICYFVF PEENTVIKSS
301: KYRPFSYNDF RSQVQEDIKT LGHKVGLKRF KINDDSD
101: TPVSYFWGTP ALTKSGVALS QTPQNVNWVE GFNVPLSQLP LLQTQDPIIA SFRLILEEYG RHLSRIARTL FEAMAKNLGH DPKQYESSLD ESSGIVRVYR
201: YPLRPNRDHA SHMEVHTDSS VLSILNQDEV GGLEVLKDGE WLSASPISNT LVINVGDMMQ VISNDKYKSV IHRVKVAKER ERLSICYFVF PEENTVIKSS
301: KYRPFSYNDF RSQVQEDIKT LGHKVGLKRF KINDDSD
001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.