Factsheet for TraesCS3D01G542800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G603000.1	Wheat	cytosol	83.43	86.24
HORVU3Hr1G117870.1	Barley	cytosol	75.15	78.88
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	68.05	75.41
CDX80345	Canola	cytosol, nucleus, peroxisome	18.34	48.82
Zm00001d035994_P001	Maize	cytosol	47.93	48.21
CDY52119	Canola	cytosol, nucleus, peroxisome	18.05	48.03
Os04t0407800-01	Rice	cytosol, nucleus, peroxisome	47.34	47.62
Bra002628.1-P	Field mustard	cytosol, nucleus, peroxisome	17.75	47.24
OQU85872	Sorghum	cytosol	46.45	44.73
CDY32695	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	25.74	42.65
GSMUA_Achr10P...	Banana	mitochondrion	43.2	40.56
VIT_06s0004g06790.t01	Wine grape	cytosol	39.65	39.76
AT5G58660.1	Thale cress	cytosol, nucleus, peroxisome	36.98	35.51
KRG98268	Soybean	cytosol	37.28	35.49
Bra020362.1-P	Field mustard	cytosol	35.8	34.77
KRH30278	Soybean	cytosol	36.09	34.37
CDY02826	Canola	cytosol	36.98	32.98
Solyc06g082030.2.1	Tomato	cytosol	33.73	32.29
PGSC0003DMT400078051	Potato	cytosol	33.14	31.55
TraesCS6D01G213100.1	Wheat	cytosol	29.88	29.11
AT3G47190.1	Thale cress	cytosol	28.11	28.7
TraesCS4D01G271300.1	Wheat	cytosol, nucleus, peroxisome	29.59	27.25
TraesCS2D01G375300.1	Wheat	cytosol	28.7	26.94

Protein Annotations

EnsemblPlants:TraesCS3D01G542800.1	EnsemblPlantsGene:TraesCS3D01G542800	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF206	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PRINTS:PR00682	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:

Description

No Description!

Coordinates

chr3D:-:613597934..613598950

Molecular Weight (calculated)

36954.9 Da

IEP (calculated)

4.859

GRAVY (calculated)

-0.220

Length

338 amino acids

Sequence
(BLAST)

001: MQQQEIHLRR FMEHQPDECA LEELELPTVD LEAEEPSLTE QLAAACRDPG VFRLVNHGVP CDLTARLFGL ARGLLELDAA NKSRLPGYFC GTPALAALPV
101: KQLNWLEGLH VEADDTGDRS HSSADAADGE AGGSALAEFM EAVSGEYVAH MARIARKLFD TLACGELGLD EEQRASYLTE RGCIFRAYRY PATASGAGRR
201: QLGMEAHTDS SVLSILNQDR VGGLQVLYGG RWLAMRPMEG ALVVNVGDML QAMSGGAYRS PEHRVVAPGW TEVGRMSLCY FAFPQEDAVI VGPPSACRQE
301: ELYRAFSYRE FREQVQADVK ASGSKVGLAR FRVPVSQS

Best Arabidopsis Sequence Match ( AT5G58660.1 )
(BLAST)

001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.