Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002628.1-P | Field mustard | cytosol, nucleus, peroxisome | 94.49 | 94.49 |
| CDX80345 | Canola | cytosol, nucleus, peroxisome | 89.76 | 89.76 |
| CDY32695 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole | 87.4 | 54.41 |
| CDX76423 | Canola | cytosol, peroxisome, plastid | 45.67 | 31.52 |
| CDY47108 | Canola | cytosol, peroxisome, plastid | 45.67 | 31.52 |
| AT5G58660.1 | Thale cress | cytosol, nucleus, peroxisome | 83.46 | 30.11 |
| CDY02826 | Canola | cytosol | 86.61 | 29.02 |
| KRG98268 | Soybean | cytosol | 61.42 | 21.97 |
| VIT_06s0004g06790.t01 | Wine grape | cytosol | 57.48 | 21.66 |
| KRH30278 | Soybean | cytosol | 59.06 | 21.13 |
| CDY35579 | Canola | cytosol, nucleus, peroxisome | 40.16 | 20.48 |
| GSMUA_Achr10P... | Banana | mitochondrion | 55.12 | 19.44 |
| TraesCS3B01G603000.1 | Wheat | cytosol | 48.82 | 18.96 |
| HORVU3Hr1G117870.1 | Barley | cytosol | 48.03 | 18.94 |
| Solyc06g082030.2.1 | Tomato | cytosol | 51.97 | 18.7 |
| Zm00001d035994_P001 | Maize | cytosol | 48.82 | 18.45 |
| Os04t0407800-01 | Rice | cytosol, nucleus, peroxisome | 48.03 | 18.15 |
| TraesCS3D01G542800.1 | Wheat | cytosol | 48.03 | 18.05 |
| PGSC0003DMT400078051 | Potato | cytosol | 50.39 | 18.03 |
| CDX94029 | Canola | cytosol | 45.67 | 17.16 |
| CDX82811 | Canola | cytosol, nucleus, peroxisome | 45.67 | 17.16 |
| CDX79045 | Canola | cytosol, nucleus, peroxisome | 45.67 | 17.16 |
| OQU85872 | Sorghum | cytosol | 47.24 | 17.09 |
| CDY10932 | Canola | cytosol, nucleus, peroxisome | 30.71 | 12.0 |
| CDX94181 | Canola | cytosol, nucleus, peroxisome | 29.92 | 11.69 |
| TraesCS3A01G537300.2 | Wheat | cytosol, nucleus, peroxisome | 25.2 | 10.49 |
| CDY56648 | Canola | cytosol, nucleus, peroxisome | 23.62 | 9.32 |
| CDX91575 | Canola | cytosol, nucleus, peroxisome | 23.62 | 9.32 |
| CDY29619 | Canola | plastid | 36.22 | 6.26 |
| CDY47111 | Canola | cytosol | 0.79 | 0.62 |
| CDY71106 | Canola | cytosol | 0.79 | 0.61 |
| CDY35580 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078IRP4 | UniProt:A0A078IRP4 | EnsemblPlants:CDY52119 | ProteinID:CDY52119 |
| ProteinID:CDY52119.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00004940001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF206 | SUPFAM:SSF51197 | UniParc:UPI0004EF093A |
| SEG:seg | : | : | : | : | : |
Description
BnaA10g29480DBnaA10g29480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRP4]
Coordinates
chrLK033058:+:50600..51056
Molecular Weight (calculated)
14632.6 Da
IEP (calculated)
8.700
GRAVY (calculated)
-0.468
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVHTDSSVI SILKEDETGG LEIMKGEQWL RVKPVADTLI INLGDIMQAM SDDEYKSVKH RVKKKHRTRE RHSVCYFVFP QRDCVIKSSN YKPFTYSEFE
101: AQVQADVQSL GTKVGLHRFS PKSPLFL
101: AQVQADVQSL GTKVGLHRFS PKSPLFL
001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.