Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- peroxisome 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019310.1-P | Field mustard | cytosol | 56.0 | 98.38 |
| CDX94181 | Canola | cytosol, nucleus, peroxisome | 96.31 | 96.31 |
| AT4G23340.1 | Thale cress | cytosol, nucleus, peroxisome | 88.0 | 88.27 |
| VIT_02s0025g03440.t01 | Wine grape | cytosol, nucleus, peroxisome | 65.54 | 66.36 |
| PGSC0003DMT400000488 | Potato | cytosol | 61.23 | 61.99 |
| KRH65048 | Soybean | cytosol, nucleus, peroxisome | 58.46 | 59.56 |
| PGSC0003DMT400040854 | Potato | cytosol, plastid | 57.23 | 58.49 |
| Solyc03g025490.2.1 | Tomato | plastid | 56.62 | 57.5 |
| KRH40458 | Soybean | cytosol, nucleus, peroxisome | 56.0 | 57.05 |
| GSMUA_Achr1P03100_001 | Banana | cytosol | 55.08 | 56.29 |
| Solyc01g094590.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 36.31 | 54.38 |
| CDX91575 | Canola | cytosol, nucleus, peroxisome | 52.0 | 52.48 |
| CDY56648 | Canola | cytosol, nucleus, peroxisome | 51.69 | 52.17 |
| KRH40460 | Soybean | cytosol | 22.77 | 46.54 |
| CDX76423 | Canola | cytosol, peroxisome, plastid | 19.38 | 34.24 |
| CDY47108 | Canola | cytosol, peroxisome, plastid | 19.38 | 34.24 |
| CDX80345 | Canola | cytosol, nucleus, peroxisome | 12.92 | 33.07 |
| CDY52119 | Canola | cytosol, nucleus, peroxisome | 12.0 | 30.71 |
| CDX94029 | Canola | cytosol | 30.15 | 28.99 |
| CDY35579 | Canola | cytosol, nucleus, peroxisome | 21.54 | 28.11 |
| CDY32695 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole | 17.54 | 27.94 |
| CDX79045 | Canola | cytosol, nucleus, peroxisome | 28.0 | 26.92 |
| CDX82811 | Canola | cytosol, nucleus, peroxisome | 28.0 | 26.92 |
| CDY47111 | Canola | cytosol | 10.46 | 20.99 |
| CDY02826 | Canola | cytosol | 24.31 | 20.84 |
| CDY71106 | Canola | cytosol | 10.46 | 20.73 |
| CDY29619 | Canola | plastid | 29.23 | 12.93 |
| CDY35580 | Canola | plastid | 2.46 | 12.5 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078FD78 | UniProt:A0A078FD78 | EnsemblPlants:CDY10932 | ProteinID:CDY10932 |
| ProteinID:CDY10932.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00048852001 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF212 | SUPFAM:SSF51197 | UniParc:UPI0004EDE17E | : | : |
Description
BnaA03g45910DBnaA03g45910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FD78]
Coordinates
chrLK032008:-:96890..98007
Molecular Weight (calculated)
36998.2 Da
IEP (calculated)
5.276
GRAVY (calculated)
-0.301
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MSELHSSLQL PVLDLTQPIQ SSVLSSLSQA CKEWGFFYVT NHGISKEMFS RIYSLSRDVF SAPLDSKLKL GPFSYTPRHI ASPYFESLVV SGPDFSSSAK
101: ASADVLFQEH EKPELRFETL QEYGDKMAEL SKRLVEILLM MILGEETGKR FYQNEFSNCH GYLRLVNYTP PQDVEKQEEL VEGLGMHTDM SCITIVYQDS
201: VGGLQMRSKE GNWIDINPGD DLLVVNIGDL MQAWSNGRLR SSEHRVVLRK LVNRVSLGFF LCFEDEKVIL APQEIVGEGN CRRYKAFKCS EYLKFRQSNE
301: VGKFERIGYT VKDFAGLTLP EHDDP
101: ASADVLFQEH EKPELRFETL QEYGDKMAEL SKRLVEILLM MILGEETGKR FYQNEFSNCH GYLRLVNYTP PQDVEKQEEL VEGLGMHTDM SCITIVYQDS
201: VGGLQMRSKE GNWIDINPGD DLLVVNIGDL MQAWSNGRLR SSEHRVVLRK LVNRVSLGFF LCFEDEKVIL APQEIVGEGN CRRYKAFKCS EYLKFRQSNE
301: VGKFERIGYT VKDFAGLTLP EHDDP
001: MSELHSSLQL PVLDLTQPIE SSILSSLSEA CKEWGFFYVT NHGISKEMFS KICSLSRDVF KAPLESKLKL GPISYTPRYI ASPYFESLVV SGPDFSDSAK
101: ASADVLFQDH HKPELRETMQ EYGAKMAELS KRLIKILLMM TLGDETGKRL YQTDFSNCHG YLRLVNYTPP HDVEKQEELV EGLGMHTDMS CITIVYQDSV
201: GGLQMRSKEG KWIDINPCND FLVVNIGDLM QAWSNGRLRS SEHRVVLRKL VNRVSLAFFL CFEDEKVILA PQEIVGEGKQ RSYKSFKCSE YLKFRQSNEE
301: GKFEKIGFTV KDFAGLKLAQ PDDP
101: ASADVLFQDH HKPELRETMQ EYGAKMAELS KRLIKILLMM TLGDETGKRL YQTDFSNCHG YLRLVNYTPP HDVEKQEELV EGLGMHTDMS CITIVYQDSV
201: GGLQMRSKEG KWIDINPCND FLVVNIGDLM QAWSNGRLRS SEHRVVLRKL VNRVSLAFFL CFEDEKVILA PQEIVGEGKQ RSYKSFKCSE YLKFRQSNEE
301: GKFEKIGFTV KDFAGLKLAQ PDDP
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JNI3]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.