Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47111 | Canola | cytosol | 95.73 | 96.91 |
| Bra020890.1-P | Field mustard | cytosol, nucleus, peroxisome | 94.51 | 45.86 |
| CDX94029 | Canola | cytosol | 84.15 | 40.83 |
| AT4G21200.1 | Thale cress | cytosol, nucleus, peroxisome | 80.49 | 39.05 |
| CDX79045 | Canola | cytosol, nucleus, peroxisome | 79.27 | 38.46 |
| CDX82811 | Canola | cytosol, nucleus, peroxisome | 77.44 | 37.57 |
| CDY35580 | Canola | plastid | 10.37 | 26.56 |
| GSMUA_Achr9P11880_001 | Banana | cytosol, nucleus, peroxisome | 43.29 | 21.78 |
| GSMUA_Achr6P21950_001 | Banana | cytosol, nucleus, peroxisome | 39.02 | 18.44 |
| GSMUA_Achr8P03660_001 | Banana | endoplasmic reticulum, golgi | 39.02 | 15.31 |
| CDX94181 | Canola | cytosol, nucleus, peroxisome | 21.34 | 10.77 |
| CDY56648 | Canola | cytosol, nucleus, peroxisome | 20.73 | 10.56 |
| CDY10932 | Canola | cytosol, nucleus, peroxisome | 20.73 | 10.46 |
| CDX91575 | Canola | cytosol, nucleus, peroxisome | 19.51 | 9.94 |
| CDY35579 | Canola | cytosol, nucleus, peroxisome | 14.63 | 9.64 |
| CDY02826 | Canola | cytosol | 21.34 | 9.23 |
| CDY29619 | Canola | plastid | 32.32 | 7.21 |
| CDY47108 | Canola | cytosol, peroxisome, plastid | 3.05 | 2.72 |
| CDX76423 | Canola | cytosol, peroxisome, plastid | 3.05 | 2.72 |
| CDY32695 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole | 1.83 | 1.47 |
| CDX80345 | Canola | cytosol, nucleus, peroxisome | 0.61 | 0.79 |
| CDY52119 | Canola | cytosol, nucleus, peroxisome | 0.61 | 0.79 |
Protein Annotations
| EnsemblPlants:CDY71106 | EnsemblPlantsGene:GSBRNA2T00011200001 | Gene3D:2.60.120.330 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR027443 |
| ncoils:Coil | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF386 | PFAM:PF14226 | ProteinID:CDY71106 | ProteinID:CDY71106.1 |
| SUPFAM:SSF51197 | UniParc:UPI0004EE4AFB | UniProt:A0A078JZU8 | MapMan:35.1 | : | : |
Description
BnaAnng36120DBnaAnng36120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JZU8]
Coordinates
chrLK044473:-:1215..1709
Molecular Weight (calculated)
19101.7 Da
IEP (calculated)
7.436
GRAVY (calculated)
-0.496
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPPFNETYK TLLYKQIKNT ENSVPQTPFS FHVTAVVEEV ELPLIDVSRL INGAEKEREK CKQDIASASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSTGSYRWGT PSATCVRQLS WSEAFHVPMT DISDNKYFTT LRYTNIVLLI NSYC
101: PFDKKSKSEK FSTGSYRWGT PSATCVRQLS WSEAFHVPMT DISDNKYFTT LRYTNIVLLI NSYC
001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSFCACLCMC DHIPLLLFIV GVLLISHC
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSFCACLCMC DHIPLLLFIV GVLLISHC
Arabidopsis Description
GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.