CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47108	Canola	cytosol, peroxisome, plastid	98.91	98.91
CDX94029	Canola	cytosol	94.57	51.48
CDX79045	Canola	cytosol, nucleus, peroxisome	90.76	49.41
AT4G21200.1	Thale cress	cytosol, nucleus, peroxisome	90.76	49.41
CDX82811	Canola	cytosol, nucleus, peroxisome	90.22	49.11
CDY52119	Canola	cytosol, nucleus, peroxisome	31.52	45.67
CDX80345	Canola	cytosol, nucleus, peroxisome	30.43	44.09
CDY32695	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	39.13	35.29
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	61.41	34.66
CDY35579	Canola	cytosol, nucleus, peroxisome	45.65	33.73
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	60.87	32.28
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	63.59	27.99
CDY10932	Canola	cytosol, nucleus, peroxisome	34.24	19.38
CDX94181	Canola	cytosol, nucleus, peroxisome	33.7	19.08
CDY02826	Canola	cytosol	38.59	18.73
CDX91575	Canola	cytosol, nucleus, peroxisome	29.35	16.77
CDY56648	Canola	cytosol, nucleus, peroxisome	29.35	16.77
CDY29619	Canola	plastid	42.39	10.61
CDY71106	Canola	cytosol	2.72	3.05
CDY47111	Canola	cytosol	1.09	1.23
CDY35580	Canola	plastid	0.0	0.0

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	GO:A0A078CMW8	EnsemblPlants:CDX76423	ProteinID:CDX76423	ProteinID:CDX76423.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00126828001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF386	SUPFAM:SSF51197	UniParc:UPI0004EDB46D	SEG:seg

Description

BnaA08g09770D

Coordinates

chrLK031807:+:1086282..1087289

Molecular Weight (calculated)

21116.3 Da

IEP (calculated)

8.092

GRAVY (calculated)

-0.342

Length

184 amino acids

Sequence
(BLAST)

001: MEKFASESEA LAYSLAEVLA EKSGRKSSFF KKTCVRNTCY LRMNRYPPCP NPSEVYGLMP HTDSDFLTIL YQDQVGGLQL IKDNRWIAVK PNPRALIINI
101: GDLFQAWSNG MYKSVEHRVM TNPTVERFST AYFLCPSYDA VIECSGDCPA YRNFSFGEFR QQVQEDVKKL GYKVGLPRFI NDIY

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.