Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52119 | Canola | cytosol, nucleus, peroxisome | 89.76 | 89.76 |
| CDY32695 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole | 97.64 | 60.78 |
| CDY02826 | Canola | cytosol | 96.85 | 32.45 |
| AT5G58660.1 | Thale cress | cytosol, nucleus, peroxisome | 85.04 | 30.68 |
| CDX76423 | Canola | cytosol, peroxisome, plastid | 44.09 | 30.43 |
| CDY47108 | Canola | cytosol, peroxisome, plastid | 44.09 | 30.43 |
| KRG98268 | Soybean | cytosol | 61.42 | 21.97 |
| KRH30278 | Soybean | cytosol | 59.84 | 21.41 |
| VIT_06s0004g06790.t01 | Wine grape | cytosol | 55.12 | 20.77 |
| CDY35579 | Canola | cytosol, nucleus, peroxisome | 40.16 | 20.48 |
| GSMUA_Achr10P... | Banana | mitochondrion | 55.12 | 19.44 |
| Os04t0407800-01 | Rice | cytosol, nucleus, peroxisome | 50.39 | 19.05 |
| TraesCS3B01G603000.1 | Wheat | cytosol | 48.82 | 18.96 |
| HORVU3Hr1G117870.1 | Barley | cytosol | 48.03 | 18.94 |
| Zm00001d035994_P001 | Maize | cytosol | 48.82 | 18.45 |
| TraesCS3D01G542800.1 | Wheat | cytosol | 48.82 | 18.34 |
| Solyc06g082030.2.1 | Tomato | cytosol | 48.82 | 17.56 |
| PGSC0003DMT400078051 | Potato | cytosol | 48.03 | 17.18 |
| OQU85872 | Sorghum | cytosol | 47.24 | 17.09 |
| CDX79045 | Canola | cytosol, nucleus, peroxisome | 44.09 | 16.57 |
| CDX82811 | Canola | cytosol, nucleus, peroxisome | 44.09 | 16.57 |
| CDX94029 | Canola | cytosol | 44.09 | 16.57 |
| CDY10932 | Canola | cytosol, nucleus, peroxisome | 33.07 | 12.92 |
| CDX94181 | Canola | cytosol, nucleus, peroxisome | 32.28 | 12.62 |
| TraesCS3A01G537300.2 | Wheat | cytosol, nucleus, peroxisome | 25.98 | 10.82 |
| CDY56648 | Canola | cytosol, nucleus, peroxisome | 22.83 | 9.01 |
| CDX91575 | Canola | cytosol, nucleus, peroxisome | 22.83 | 9.01 |
| CDY29619 | Canola | plastid | 37.8 | 6.53 |
| CDY47111 | Canola | cytosol | 0.79 | 0.62 |
| CDY71106 | Canola | cytosol | 0.79 | 0.61 |
| CDY35580 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX80345 | EnsemblPlantsGene:GSBRNA2T00133395001 | Gene3D:2.60.120.330 | GO:A0A078CU14 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF206 | PFAM:PF03171 | PFscan:PS51471 |
| ProteinID:CDX80345 | ProteinID:CDX80345.1 | SUPFAM:SSF51197 | UniParc:UPI0004EE0573 | MapMan:50.1.13 | : |
Description
BnaC09g33970D
Coordinates
chrLK031820:-:1997912..1998388
Molecular Weight (calculated)
14520.5 Da
IEP (calculated)
6.256
GRAVY (calculated)
-0.331
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVHTDSSVI SILKEDETGG LEIMKGEQWL RVKPVADTLI VNLGDMMQAI SDNEYKSVEH RVKKKDMTTK RHSVCYFVFP QRDCVIKSSN YKPFTYSEFE
101: AQVQADVQSL GTKIGLLRFT PESPLFL
101: AQVQADVQSL GTKIGLLRFT PESPLFL
001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.