Factsheet for Solyc06g082030.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078051	Potato	cytosol	92.92	92.39
CDY52119	Canola	cytosol, nucleus, peroxisome	18.7	51.97
Bra002628.1-P	Field mustard	cytosol, nucleus, peroxisome	18.41	51.18
CDX80345	Canola	cytosol, nucleus, peroxisome	17.56	48.82
VIT_06s0004g06790.t01	Wine grape	cytosol	44.48	46.59
KRG98268	Soybean	cytosol	46.46	46.2
KRH30278	Soybean	cytosol	46.46	46.2
Bra020362.1-P	Field mustard	cytosol	42.78	43.39
AT5G58660.1	Thale cress	cytosol, nucleus, peroxisome	43.06	43.18
CDY32695	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	24.36	42.16
AT3G47190.1	Thale cress	cytosol	39.38	41.99
CDY02826	Canola	cytosol	42.49	39.58
GSMUA_Achr10P...	Banana	mitochondrion	39.94	39.17
Zm00001d035994_P001	Maize	cytosol	34.28	36.01
Os04t0407800-01	Rice	cytosol, nucleus, peroxisome	33.99	35.71
HORVU3Hr1G117870.1	Barley	cytosol	32.29	35.4
OQU85872	Sorghum	cytosol	34.56	34.76
TraesCS3B01G603000.1	Wheat	cytosol	32.01	34.56
TraesCS3D01G542800.1	Wheat	cytosol	32.29	33.73
Solyc04g008670.1.1	Tomato	golgi	30.31	29.97
Solyc02g080120.1.1	Tomato	cytosol, mitochondrion, nucleus, peroxisome	31.16	28.95
Solyc10g005360.2.1	Tomato	cytosol	23.23	28.37
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	24.36	28.2
Solyc03g025490.2.1	Tomato	plastid	25.5	28.12
Solyc01g094590.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	15.58	25.35

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	UniProt:K4CA62	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF206	SUPFAM:SSF51197	EnsemblPlantsGene:Solyc06g082030.2
EnsemblPlants:Solyc06g082030.2.1	UniParc:UPI0002765594	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6:+:47979516..47985025

Molecular Weight (calculated)

40563.0 Da

IEP (calculated)

5.802

GRAVY (calculated)

-0.381

Length

353 amino acids

Sequence
(BLAST)

001: MSQSYNFESY PPLFRPSPNI SQIQESDETE SSLLLDSYIP VIDYFKRTAP IITTTKYQDV SEDGNLISEA CRDWGLFRLV NHGIPFSLLN QIEEHAKKLF
101: SLPYETKKAF FASSSSSNFV SPISYFWGSP ALSPSGAALA PKNSEQQNNN HTLQWMEGFN VSLAQLSNIH YQDLLLETFR CLLEEYGKEL CRLATEIFKI
201: LGPFESNYMS LETGLLRVYR YPRCLEPERT WGIDTHTDSS VLSIIHQDDV GGLQVYKDHQ WIDVNPLPNT LIVNIGDMLQ AMSDDRYMSV KHRVKVNRHK
301: ERISIGYFVF PDEDTIIQST KYNPFSYADF RAQVQHDLKT LGLKTGLQKF KFS

Best Arabidopsis Sequence Match ( AT5G58660.1 )
(BLAST)

001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.