Factsheet for Zm00001d035994_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85872	Sorghum	cytosol	82.44	78.92
Os04t0407800-01	Rice	cytosol, nucleus, peroxisome	55.95	55.95
TraesCS3B01G603000.1	Wheat	cytosol	50.0	51.38
Bra002628.1-P	Field mustard	cytosol, nucleus, peroxisome	19.05	50.39
HORVU3Hr1G117870.1	Barley	cytosol	48.21	50.31
CDX80345	Canola	cytosol, nucleus, peroxisome	18.45	48.82
CDY52119	Canola	cytosol, nucleus, peroxisome	18.45	48.82
TraesCS3D01G542800.1	Wheat	cytosol	48.21	47.93
CDY32695	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	27.98	46.08
GSMUA_Achr10P...	Banana	mitochondrion	45.83	42.78
VIT_06s0004g06790.t01	Wine grape	cytosol	42.26	42.14
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	37.2	40.98
KRG98268	Soybean	cytosol	40.77	38.59
KRH30278	Soybean	cytosol	39.88	37.75
AT5G58660.1	Thale cress	cytosol, nucleus, peroxisome	39.29	37.5
Bra020362.1-P	Field mustard	cytosol	38.1	36.78
CDY02826	Canola	cytosol	38.99	34.56
Solyc06g082030.2.1	Tomato	cytosol	36.01	34.28
PGSC0003DMT400078051	Potato	cytosol	35.71	33.8
AT3G47190.1	Thale cress	cytosol	32.14	32.63
Zm00001d017294_P001	Maize	cytosol	33.04	30.75
Zm00001d002999_P001	Maize	cytosol, peroxisome, plastid	33.04	30.66
Zm00001d018617_P001	Maize	cytosol	29.17	27.68

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	UniProt:A0A1D6LK61	ProteinID:AQK80102.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF206	SUPFAM:SSF51197	UniParc:UPI00084409A4	EnsemblPlantsGene:Zm00001d035994	EnsemblPlants:Zm00001d035994_P001
EnsemblPlants:Zm00001d035994_T001	SEG:seg	:	:	:	:

Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Coordinates

chr6:-:65164556..65165566

Molecular Weight (calculated)

35939.5 Da

IEP (calculated)

6.586

GRAVY (calculated)

-0.185

Length

336 amino acids

Sequence
(BLAST)

001: MASGSDSRTA ADPSYPPFPL LEQDDEGGGH VHEQEQEARR GGALELPTVD LEAPGEALAA ACRELGVFRL ANHGVPAALS ARLFALARAA LAGAPFRDKR
101: AQPGYFWGTP ALSLRVRDVN WVEGFHVALG EAQQQQQHAP VPPPPLGDLL GLARAEYGAH MTRVARTLFD ALAPALGLGA AQAASYLAER DGFLRVYRYP
201: RCPEPGRLGM EAHTDSSVLS VINQEEGAGG LQVLHGGAWR DVAPAAGAST LLVNLGDMAR AISGDAYRSV RHRVAASQAA ERLSLCYFAF PRDDAVITCG
301: AGRYRPFTYA EFREQVQADI KATGSKVGLE RFLLHH

Best Arabidopsis Sequence Match ( AT5G58660.1 )
(BLAST)

001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.