Factsheet for TraesCS3A01G537300.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G603000.1	Wheat	cytosol	73.44	68.5
TraesCS3D01G542800.1	Wheat	cytosol	75.41	68.05
HORVU3Hr1G117870.1	Barley	cytosol	65.25	61.8
Zm00001d035994_P001	Maize	cytosol	40.98	37.2
Os04t0407800-01	Rice	cytosol, nucleus, peroxisome	39.67	36.01
OQU85872	Sorghum	cytosol	40.66	35.33
GSMUA_Achr10P...	Banana	mitochondrion	36.07	30.56
CDY32695	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	19.67	29.41
VIT_06s0004g06790.t01	Wine grape	cytosol	32.46	29.38
AT5G58660.1	Thale cress	cytosol, nucleus, peroxisome	32.13	27.84
Bra020362.1-P	Field mustard	cytosol	30.82	27.01
CDX80345	Canola	cytosol, nucleus, peroxisome	10.82	25.98
KRG98268	Soybean	cytosol	30.16	25.92
KRH30278	Soybean	cytosol	29.51	25.35
CDY52119	Canola	cytosol, nucleus, peroxisome	10.49	25.2
Bra002628.1-P	Field mustard	cytosol, nucleus, peroxisome	10.49	25.2
CDY02826	Canola	cytosol	31.15	25.07
Solyc06g082030.2.1	Tomato	cytosol	28.2	24.36
PGSC0003DMT400078051	Potato	cytosol	28.2	24.23
AT3G47190.1	Thale cress	cytosol	23.61	21.75
TraesCS6A01G221900.1	Wheat	cytosol	23.61	20.75
TraesCS4A01G033200.1	Wheat	cytosol, nucleus, peroxisome	23.93	19.89
TraesCS5A01G543100.1	Wheat	cytosol	23.28	19.89
TraesCS2A01G379000.1	Wheat	cytosol	23.28	19.56

Protein Annotations

EnsemblPlants:TraesCS3A01G537300.2	EnsemblPlantsGene:TraesCS3A01G537300	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF206	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PRINTS:PR00682	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:

Description

No Description!

Coordinates

chr3A:-:749203153..749204070

Molecular Weight (calculated)

33304.6 Da

IEP (calculated)

8.160

GRAVY (calculated)

-0.358

Length

305 amino acids

Sequence
(BLAST)

001: MEHLPDECEL EELEVSTVDL EAEEPRLMEQ LAAACRDPGV FRLVNHGVPS GLTARLFGLA RGLLELDAAN KSRLPGYFCG TPALAALPVK QLNWLEGLHV
101: EADDTGDRCH SCPDGADGEA GGTALAEFME AVSGEYVAHM ARIARKLFDA LASGELGLDE EQRASYLTER GSIFRAYRYP ATAPGRRQLG MEAHTDSSVL
201: SILNQDMVGG LQVFHGGRWC FVRPVEGALV VNVGDMLQAM SRARTGARTT GWWRRPGRRW TGCRSATSRS RRRTPSSSAR RQLVVRRRCT GGSATVSSGS
301: RCRRT

Best Arabidopsis Sequence Match ( AT5G58660.2 )
(BLAST)

001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQVNKVYP

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.