Factsheet for TraesCS5A01G543100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G376100.1	Wheat	cytosol	82.63	86.01
TraesCS2A01G379000.1	Wheat	cytosol	76.47	75.21
TraesCS4A01G033200.1	Wheat	cytosol, nucleus, peroxisome	73.95	71.93
Os04t0522500-01	Rice	cytosol	71.15	70.95
Zm00001d002999_P001	Maize	cytosol, peroxisome, plastid	66.39	65.47
KXG26736	Sorghum	cytosol, peroxisome, plastid	66.11	63.78
TraesCS6A01G221900.1	Wheat	cytosol	61.62	63.4
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	55.18	57.27
KRH29245	Soybean	cytosol	50.98	53.85
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	52.38	51.52
PGSC0003DMT400068810	Potato	cytosol	47.34	50.75
Solyc04g008670.1.1	Tomato	golgi	47.62	47.62
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	50.7	44.69
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	19.89	23.28

Protein Annotations

EnsemblPlants:TraesCS5A01G543100.1	EnsemblPlantsGene:TraesCS5A01G543100	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF177	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr5A:+:698888618..698889913

Molecular Weight (calculated)

38719.8 Da

IEP (calculated)

5.992

GRAVY (calculated)

-0.153

Length

357 amino acids

Sequence
(BLAST)

001: MPASAEVATT NDPPLVDSYC ALLLGGELGS SSGFVPAAQA LSAESLTVLQ RDLPTIDLKR LTSGDPRERD VCADAMASAA SEWGFFQVTN HGVGRELLEE
101: MRREQAVLFH QPFDTKEKAG LVDGSYRWGN PTATSLRQLS WSEAFHVPLA SICGEDCVHA QLSSLSLRGV MQEVADAMSR VADTVAGTLA KNLGHAGSAF
201: PAAAGCDGTT CFLRLNRYPL CPFADTLGMV PHTDSDFLTI VCQDQVGGLE IMNDSHWVAV KPHPDALVVN VGDLFQAWSN NRYKSVEHKV VANSKAERFS
301: VAYFLCPSHD SLIGTYGKPS PYRPFTFGEY RRKVQDDVRQ TGKKIGLPNF LKCSTIS

Best Arabidopsis Sequence Match ( AT1G50960.1 )
(BLAST)

001: MASQPPFKTN FCSIFGSSFP NSTSESNTNT STIQTSGIKL PVIDLSHLTS GEEVKRKRCV KQMVAAAKEW GFFQIVNHGI PKDVFEMMLL EEKKLFDQPF
101: SVKVRERFSD LSKNSYRWGN PSATSPAQYS VSEAFHIILS EVSRISDDRN NLRTIVETYV QEIARVAQMI CEILGKQVNV SSEYFENIFE LENSFLRLNK
201: YHPSVFGSEV FGLVPHTDTS FLTILSQDQI GGLELENNGQ WISVKPCLEA LTVNIGDMFQ ALSNGVYQSV RHRVISPANI ERMSIAFFVC PYLETEIDCF
301: GYPKKYRRFS FREYKEQSEH DVKETGDKVG LSRFLI

Arabidopsis Description

GA2OX7Gibberellin 2-beta-dioxygenase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6I4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.