Factsheet for TraesCS4B01G376100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G543100.1	Wheat	cytosol	86.01	82.63
TraesCS4B01G376200.1	Wheat	cytosol	84.26	81.64
TraesCS2B01G396000.1	Wheat	cytosol	79.88	75.48
TraesCS4B01G272100.1	Wheat	cytosol, peroxisome, plastid	79.01	74.04
Os04t0522500-01	Rice	cytosol	74.64	71.51
Zm00001d002999_P001	Maize	cytosol, peroxisome, plastid	68.22	64.64
KXG26736	Sorghum	cytosol, peroxisome, plastid	69.1	64.05
TraesCS6B01G259200.1	Wheat	cytosol	64.14	63.4
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	59.77	59.59
KRH29245	Soybean	cytosol	52.77	53.55
PGSC0003DMT400068810	Potato	cytosol	51.31	52.85
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	54.81	51.79
Solyc04g008670.1.1	Tomato	golgi	51.02	49.02
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	52.77	44.69
TraesCS3B01G603000.1	Wheat	cytosol	28.86	30.28

Protein Annotations

EnsemblPlants:TraesCS4B01G376100.1	EnsemblPlantsGene:TraesCS4B01G376100	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF177	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SUPFAM:SSF51197	MapMan:50.1.13	:	:	:

Description

No Description!

Coordinates

chr4B:-:659688184..659689650

Molecular Weight (calculated)

37899.1 Da

IEP (calculated)

6.316

GRAVY (calculated)

-0.299

Length

343 amino acids

Sequence
(BLAST)

001: MAAFDENGTT DPPLADSYRK LLRRDELGGA LARESLAVLE RDLPMIDLKR LTSGDARERD VCADAMASAA SEWGFFQVIN HGVGRELLEE MRREQAMLFH
101: QPFDTKEKAG LLNGSYRWGN ATATSLRQLS WSEAFHVPLA SISEEDAKLS SLRGMMQEVA DAMSRVAETV AGTLAKNLGQ AGSTFPAAAG CDGTTCFLRL
201: NRYPACPFAP DTFGMMPHTD SDFLTVLCQD QVGGLEIMKD SHWVAVKPHA DALLVNVGDL FQAWSNNIYK SVEHKVLANS KAERFSIAYF MCPSHDSLIG
301: TCGGPSPYRP FTFEEYRRKV QDDVRRTGKK IGLPNFLKRS TIS

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.