Factsheet for TraesCS2B01G396000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G379000.1	Wheat	cytosol	95.87	95.87
TraesCS2D01G375300.1	Wheat	cytosol	95.04	95.83
Os04t0522500-01	Rice	cytosol	80.17	81.28
TraesCS4B01G272100.1	Wheat	cytosol, peroxisome, plastid	80.72	80.05
TraesCS4B01G376100.1	Wheat	cytosol	75.48	79.88
TraesCS4B01G376200.1	Wheat	cytosol	74.1	75.99
KXG26736	Sorghum	cytosol, peroxisome, plastid	74.38	72.97
Zm00001d002999_P001	Maize	cytosol, peroxisome, plastid	71.63	71.82
TraesCS6B01G259200.1	Wheat	cytosol	68.04	71.18
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	58.95	62.21
KRH29245	Soybean	cytosol	53.72	57.69
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	55.92	55.92
HORVU2Hr1G090030.4	Barley	peroxisome	54.82	55.43
PGSC0003DMT400068810	Potato	cytosol	50.69	55.26
Solyc04g008670.1.1	Tomato	golgi	50.41	51.26
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	52.89	47.41
TraesCS3B01G603000.1	Wheat	cytosol	28.37	31.5

Protein Annotations

EnsemblPlants:TraesCS2B01G396000.1	EnsemblPlantsGene:TraesCS2B01G396000	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF177	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr2B:+:562217195..562219562

Molecular Weight (calculated)

39890.4 Da

IEP (calculated)

6.419

GRAVY (calculated)

-0.250

Length

363 amino acids

Sequence
(BLAST)

001: MPAFAEPAID PPLADSYRAL LRSDQLHRGG IAPALSPAVL ESVAVLERDL PMIDLKRLTS GDAWERKACA DAMACAASEW GFFQVINHGV GRELLEEMRR
101: EQARLFRLPF DTKEKAGLLN GSYRWGNPTA TSLRHLSWSE AFHVPLASIS REDCDYGKLS SLRGVMQEVA DAMSHVADTV AAALAEDLGH DAGGGEPAFP
201: AGCDGTTCFL RLNRYPACPF APDTFGLVPH TDSDFLTILC QDQVGGLQLM KDSRWVAVKP RPDALIVNIG DLFQAWSNNR YKSVEHKVVA NPKAERLSVA
301: YFLCPSYDSP VSTCGEPSAY RPFTFGEYRR KVQDDVKRTG KKIGLPNFLK QSPVDGMNHT LCS

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.