Factsheet for Solyc04g008670.1.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
plastid 1
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068810	Potato	cytosol	87.39	93.69
KRH29245	Soybean	cytosol	59.94	63.31
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	57.98	60.17
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	60.78	59.78
GSMUA_Achr9P21260_001	Banana	cytosol	52.94	57.1
TraesCS6A01G221900.1	Wheat	cytosol	52.94	54.47
TraesCS6B01G259200.1	Wheat	cytosol	52.66	54.18
TraesCS6D01G213100.1	Wheat	cytosol	52.38	53.89
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	61.06	53.83
HORVU4Hr1G072540.2	Barley	mitochondrion	47.34	53.31
Zm00001d017294_P001	Maize	cytosol	52.38	51.8
TraesCS4B01G376100.1	Wheat	cytosol	49.02	51.02
TraesCS2D01G375300.1	Wheat	cytosol	51.26	50.83
TraesCS2A01G379000.1	Wheat	cytosol	51.26	50.41
TraesCS2B01G396000.1	Wheat	cytosol	51.26	50.41
KXG30679	Sorghum	cytosol	53.5	50.0
Zm00001d002999_P001	Maize	cytosol, peroxisome, plastid	50.7	50.0
TraesCS4B01G272100.1	Wheat	cytosol, peroxisome, plastid	50.42	49.18
TraesCS4B01G376200.1	Wheat	cytosol	48.74	49.15
KXG26736	Sorghum	cytosol, peroxisome, plastid	50.7	48.92
TraesCS4D01G271300.1	Wheat	cytosol, nucleus, peroxisome	50.14	48.77
Os02t0630300-01	Rice	cytosol	40.62	48.49
Os04t0522500-01	Rice	cytosol	48.46	48.32
TraesCS4A01G033200.1	Wheat	cytosol, nucleus, peroxisome	49.58	48.23
Solyc02g080120.1.1	Tomato	cytosol, mitochondrion, nucleus, peroxisome	50.98	47.89
Os07t0103500-01	Rice	cytosol	45.66	47.8
TraesCS5A01G543100.1	Wheat	cytosol	47.62	47.62
Solyc10g005360.2.1	Tomato	cytosol	38.38	47.4
EER95722	Sorghum	cytosol	46.22	46.09
Zm00001d018617_P001	Maize	cytosol	45.38	45.76
HORVU2Hr1G090030.4	Barley	peroxisome	36.69	36.49
Solyc06g082030.2.1	Tomato	cytosol	29.97	30.31
Solyc01g094590.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	17.93	29.49
Solyc03g025490.2.1	Tomato	plastid	25.21	28.12

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	UniProt:K4BP23	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF177	SUPFAM:SSF51197	EnsemblPlantsGene:Solyc04g008670.1	EnsemblPlants:Solyc04g008670.1.1
UniParc:UPI0002767315	:	:	:	:	:

Description

No Description!

Coordinates

chr4:+:2314687..2317056

Molecular Weight (calculated)

41414.9 Da

IEP (calculated)

7.543

GRAVY (calculated)

-0.311

Length

357 amino acids

Sequence
(BLAST)

001: MYTLFIPKLF FISHIFLVQF DHNMMIESWN PPLLHDYSKL SRLQSNRDCS NNGVLMMEEL ELPMIDLNGL KSRDEREVIR CENAIAKASS EWGFFQVVNH
101: GVSLELLRKM RNEQMKLFKA PFEMKANCGL LNNSYRWGNS TATCPKQFNW SEAFHIPVTK ISENASYGEF TTLRDVMVEY ATSMQDLAKS LASVLVKKLD
201: HKDSEIGEIC NENSCFLRLN HYPSCQLPQE IFGLVPHTDS DFLTILHQDE VGGLQLMKDS KWVAVKPNQN ALIVNIGDLF QAWSNDVYKS VEHKVMANGK
301: KERFSIAYFL CPSYDFKIRS YKEPSIYKKF TFGEYRYQIQ QDVKFIGHKV GLSRFLQ

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.