Factsheet for TraesCS4D01G271300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G272100.1	Wheat	cytosol, peroxisome, plastid	94.82	95.08
TraesCS4A01G033200.1	Wheat	cytosol, nucleus, peroxisome	91.55	91.55
HORVU4Hr1G072540.2	Barley	mitochondrion	77.93	90.22
TraesCS2D01G375300.1	Wheat	cytosol	79.56	81.11
Os04t0522500-01	Rice	cytosol	71.66	73.46
KXG26736	Sorghum	cytosol, peroxisome, plastid	68.12	67.57
Zm00001d002999_P001	Maize	cytosol, peroxisome, plastid	66.21	67.13
TraesCS6D01G213100.1	Wheat	cytosol	62.67	66.28
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	55.59	59.3
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	53.95	54.55
PGSC0003DMT400068810	Potato	cytosol	49.32	54.35
KRH29245	Soybean	cytosol	49.86	54.14
Solyc04g008670.1.1	Tomato	golgi	48.77	50.14
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	49.86	45.19
TraesCS3D01G542800.1	Wheat	cytosol	27.25	29.59

Protein Annotations

EnsemblPlants:TraesCS4D01G271300.1	EnsemblPlantsGene:TraesCS4D01G271300	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF177	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SUPFAM:SSF51197	MapMan:50.1.13	:	:	:

Description

No Description!

Coordinates

chr4D:+:441900869..441902067

Molecular Weight (calculated)

39977.2 Da

IEP (calculated)

5.612

GRAVY (calculated)

-0.273

Length

367 amino acids

Sequence
(BLAST)

001: MLAFAEGTSC TTTDPPLADS YRALLCRGEL EGGGAAPAHA LESLAMLERD LPIIDLKHLT SRDARESKAC ADAMARAASE WGFFQVVNHG VGRELLEEMR
101: REQTRLFRLP FGTKDKAGLL NGSYRWGNPT ATSLGQLSWS ESFHVPLPSI SREDCDYGKL STLRGVMQEV ADAMLRVADT VAGTLAENLG HEAGGSESAF
201: PAGCDGTTCF LRLNRYPACP FAADSLGMVP HTDSDFLTIL CQDQVGGLQL IKDSRWVAVK PHADALIVNV GDLFQAWSNN RYKSVEHKVV ANSKAERFSV
301: AYFLCPSSDS SVGTCGEPSP YKPFTFGEYR RSVHDDVERT GKKIGLPNFL KRSTVHGLDD DTMDLSS

Best Arabidopsis Sequence Match ( AT1G50960.1 )
(BLAST)

001: MASQPPFKTN FCSIFGSSFP NSTSESNTNT STIQTSGIKL PVIDLSHLTS GEEVKRKRCV KQMVAAAKEW GFFQIVNHGI PKDVFEMMLL EEKKLFDQPF
101: SVKVRERFSD LSKNSYRWGN PSATSPAQYS VSEAFHIILS EVSRISDDRN NLRTIVETYV QEIARVAQMI CEILGKQVNV SSEYFENIFE LENSFLRLNK
201: YHPSVFGSEV FGLVPHTDTS FLTILSQDQI GGLELENNGQ WISVKPCLEA LTVNIGDMFQ ALSNGVYQSV RHRVISPANI ERMSIAFFVC PYLETEIDCF
301: GYPKKYRRFS FREYKEQSEH DVKETGDKVG LSRFLI

Arabidopsis Description

GA2OX7Gibberellin 2-beta-dioxygenase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6I4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.