CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002999_P001	Maize	cytosol, peroxisome, plastid	85.68	87.57
Os04t0522500-01	Rice	cytosol	74.05	76.54
TraesCS2D01G375300.1	Wheat	cytosol	73.51	75.56
TraesCS2A01G379000.1	Wheat	cytosol	74.05	75.48
TraesCS2B01G396000.1	Wheat	cytosol	72.97	74.38
HORVU4Hr1G072540.2	Barley	mitochondrion	61.62	71.92
TraesCS4B01G376100.1	Wheat	cytosol	64.05	69.1
TraesCS4B01G272100.1	Wheat	cytosol, peroxisome, plastid	68.11	68.85
TraesCS4D01G271300.1	Wheat	cytosol, nucleus, peroxisome	67.57	68.12
TraesCS4B01G376200.1	Wheat	cytosol	65.14	68.08
TraesCS4A01G033200.1	Wheat	cytosol, nucleus, peroxisome	66.49	67.03
TraesCS5A01G543100.1	Wheat	cytosol	63.78	66.11
KXG30679	Sorghum	cytosol	66.76	64.66
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	55.41	59.59
KRH29245	Soybean	cytosol	51.62	56.51
PGSC0003DMT400068810	Potato	cytosol	49.46	54.95
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	53.24	54.27
Solyc04g008670.1.1	Tomato	golgi	48.92	50.7
HORVU2Hr1G090030.4	Barley	peroxisome	48.92	50.42
EER95722	Sorghum	cytosol	48.11	49.72
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	51.08	46.67
OQU85872	Sorghum	cytosol	28.92	30.48

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	UniProt:A0A1B6PM44	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009685	GO:GO:0009987
GO:GO:0016491	GO:GO:0045543	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	EnsemblPlants:KXG26736	ProteinID:KXG26736	ProteinID:KXG26736.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF177	EnsemblPlantsGene:SORBI_3006G150800	SUPFAM:SSF51197
UniParc:UPI00081ADC67	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:51169152..51174294

Molecular Weight (calculated)

40020.5 Da

IEP (calculated)

8.052

GRAVY (calculated)

-0.209

Length

370 amino acids

Sequence
(BLAST)

001: MRYVAATPTM PALTTTTAES AAEPPLADSY LDLLRRGGIA TPPRTEGRCC VQERELPLID LSCLQQRSGG GGGSARAACA DAMARAASEW GFFQVTGHGV
101: SRALLERLRA EQARLFRLPF ETKAKAGLLN GSYRWGAPTA ATSLRHLSWS EAFHVPLASI SGAACDFGDL SSLRGVMQEV ADAMSRVAKT VAVALAGSLL
201: QGGGHDEHEA AAAFPAGCDE TTCYLRLNRY PACPFAADTF GLVPHTDSDF LTVLCQDHVG GLQLLKDGRW VAVKPRPDAL IVNIGDLFQA WSNNRYKSVE
301: HKVVANATAE RFSAAYFLCP SYDSPVGTCG EPSPYRDFTF GEYRRKVQED VKRTGRKIGL PNFLKQQSRQ

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.