Factsheet for TraesCS4A01G033200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G271300.1	Wheat	cytosol, nucleus, peroxisome	91.55	91.55
TraesCS4B01G272100.1	Wheat	cytosol, peroxisome, plastid	91.01	91.26
HORVU4Hr1G072540.2	Barley	mitochondrion	74.66	86.44
TraesCS2A01G379000.1	Wheat	cytosol	77.66	78.51
TraesCS5A01G543100.1	Wheat	cytosol	71.93	73.95
Os04t0522500-01	Rice	cytosol	70.03	71.79
KXG26736	Sorghum	cytosol, peroxisome, plastid	67.03	66.49
Zm00001d002999_P001	Maize	cytosol, peroxisome, plastid	65.12	66.02
TraesCS6A01G221900.1	Wheat	cytosol	60.22	63.69
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	55.31	59.01
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	53.95	54.55
KRH29245	Soybean	cytosol	49.59	53.85
PGSC0003DMT400068810	Potato	cytosol	48.77	53.75
Solyc04g008670.1.1	Tomato	golgi	48.23	49.58
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	49.59	44.94
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	19.89	23.93

Protein Annotations

EnsemblPlants:TraesCS4A01G033200.1	EnsemblPlantsGene:TraesCS4A01G033200	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF177	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SUPFAM:SSF51197	MapMan:50.1.13	:	:	:

Description

No Description!

Coordinates

chr4A:-:25496521..25497946

Molecular Weight (calculated)

40366.8 Da

IEP (calculated)

5.664

GRAVY (calculated)

-0.245

Length

367 amino acids

Sequence
(BLAST)

001: MLAFAEGTSC TTTDPPLADS YRALLCRGEL EGVGAASAHA VESLAMLERD LPIIDLERLA SRDSRESKAC ADAMARAASE WGFFQVVNHG VGRDLLEEMR
101: REQAKLFRLP FRTKDKAGLL NGSYRWGNPT ATSLGQLSWS ESFHVPLPSI SREDCDYGKL NSLRGVMQVV ADAMSRVAYT VAGTLAENLG HEAGGGEPVF
201: PAGCDGTTCF LRLNRYPACP FAADFFGMVP HTDSDFLTIL CQDQVGGLQL IKDSHWVAVK PRADALIVNV GDLFQAWSNN RYKSVEHKVV ANSKAERFSI
301: AYFMCPLSDS PVGTYGEPSP YKPFTFEEYR RSVRDDVERT GKKIGLPNFL KRSTVHGLDD DIMDLSS

Best Arabidopsis Sequence Match ( AT1G50960.1 )
(BLAST)

001: MASQPPFKTN FCSIFGSSFP NSTSESNTNT STIQTSGIKL PVIDLSHLTS GEEVKRKRCV KQMVAAAKEW GFFQIVNHGI PKDVFEMMLL EEKKLFDQPF
101: SVKVRERFSD LSKNSYRWGN PSATSPAQYS VSEAFHIILS EVSRISDDRN NLRTIVETYV QEIARVAQMI CEILGKQVNV SSEYFENIFE LENSFLRLNK
201: YHPSVFGSEV FGLVPHTDTS FLTILSQDQI GGLELENNGQ WISVKPCLEA LTVNIGDMFQ ALSNGVYQSV RHRVISPANI ERMSIAFFVC PYLETEIDCF
301: GYPKKYRRFS FREYKEQSEH DVKETGDKVG LSRFLI

Arabidopsis Description

GA2OX7Gibberellin 2-beta-dioxygenase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6I4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.