Factsheet for GSMUA_AchrUn_randomP06450_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P21260_001	Banana	cytosol	68.31	71.0
KRH29245	Soybean	cytosol	62.21	63.31
PGSC0003DMT400068810	Potato	cytosol	60.76	62.76
TraesCS6B01G259200.1	Wheat	cytosol	63.08	62.54
TraesCS6D01G213100.1	Wheat	cytosol	62.79	62.25
TraesCS6A01G221900.1	Wheat	cytosol	62.5	61.96
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	63.66	60.33
TraesCS4B01G376100.1	Wheat	cytosol	59.59	59.77
HORVU4Hr1G072540.2	Barley	mitochondrion	54.65	59.31
TraesCS2A01G379000.1	Wheat	cytosol	62.5	59.23
TraesCS2B01G396000.1	Wheat	cytosol	62.21	58.95
TraesCS2D01G375300.1	Wheat	cytosol	61.63	58.89
Zm00001d017294_P001	Maize	cytosol	61.34	58.45
Solyc04g008670.1.1	Tomato	golgi	60.17	57.98
Os04t0522500-01	Rice	cytosol	59.3	56.98
Zm00001d002999_P001	Maize	cytosol, peroxisome, plastid	59.59	56.63
TraesCS4B01G272100.1	Wheat	cytosol, peroxisome, plastid	60.17	56.56
TraesCS4B01G376200.1	Wheat	cytosol	57.85	56.21
TraesCS4D01G271300.1	Wheat	cytosol, nucleus, peroxisome	59.3	55.59
Os02t0630300-01	Rice	cytosol	48.26	55.52
KXG26736	Sorghum	cytosol, peroxisome, plastid	59.59	55.41
TraesCS4A01G033200.1	Wheat	cytosol, nucleus, peroxisome	59.01	55.31
TraesCS5A01G543100.1	Wheat	cytosol	57.27	55.18
KXG30679	Sorghum	cytosol	61.05	54.97
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	61.92	52.59
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	48.84	51.53
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	50.29	49.86
Os07t0103500-01	Rice	cytosol	47.38	47.8
Zm00001d018617_P001	Maize	cytosol	47.97	46.61
EER95722	Sorghum	cytosol	47.67	45.81
HORVU2Hr1G090030.4	Barley	peroxisome	42.15	40.39
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	48.55	39.95
GSMUA_Achr10P...	Banana	mitochondrion	30.81	29.44
GSMUA_Achr1P03100_001	Banana	cytosol	27.03	29.25

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG06450_001
EnsemblPlants:GSMUA_AchrUn_randomP06450_001	EnsemblPlants:GSMUA_AchrUn_randomT06450_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0U6V6
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF177
SUPFAM:SSF51197	UniParc:UPI000295A8FC	SEG:seg	:	:	:

Description

Gibberellin 2-beta-dioxygenase 8 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG06450_001]

Coordinates

chrchrUn_random:-:26248924..26250412

Molecular Weight (calculated)

39096.5 Da

IEP (calculated)

5.893

GRAVY (calculated)

-0.330

Length

344 amino acids

Sequence
(BLAST)

001: MKARDCVCDP PLADSYQELS YKSTQAELRQ HDQDCEVIAE CELPMIDLRG LRSCNEEERH ACVEAIAKAS TEWGFFQVLN HGISRELLEE MWREQIKLFA
101: LPFEKKARSR LLNDSYRWGT PTATSLHQFS WSEAFHVPLV KISEKGSCYG EFSSLRDAME KLAAAMSELA TTLAGALAES LGYDSRGFPE SCNKSTCFLR
201: LNHYPPCPFS AEIFGLMPHT DSDFLTILYQ DQVGGLQLMK DSKWVAVKPN PDALIVNIGD LFQAWSNDVY KSVEHKVLIN SKRDRYSIAY FLCPSYESTI
301: GSCKKPSIYK DFTFGEYRKQ VQDDVKITGQ KIGLPRFLLQ NISL

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.