Factsheet for Os07t0103500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

cytosol: 24475234
nucleus: 24475234

gfp PMID: 24475234 doi

C Shan, Z Mei, J Duan, H Chen, H Feng, W Cai

Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China., Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018617_P001	Maize	cytosol	64.52	62.15
EER95722	Sorghum	cytosol	62.76	59.78
KRH29245	Soybean	cytosol	49.27	49.7
PGSC0003DMT400068810	Potato	cytosol	48.39	49.55
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	47.8	47.38
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	50.15	47.11
Solyc04g008670.1.1	Tomato	golgi	47.8	45.66
Os04t0522500-01	Rice	cytosol	46.63	44.41
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	49.27	41.48
Os02t0630300-01	Rice	cytosol	36.07	41.14
Os04t0407800-01	Rice	cytosol, nucleus, peroxisome	29.03	29.46

Protein Annotations

Gene3D:2.60.120.330	EntrezGene:4342182	MapMan:50.1.13	ProteinID:BAC10398.1	ProteinID:BAF20604.1	ProteinID:BAS99697.1
InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
EnsemblPlantsGene:Os07g0103500	EnsemblPlants:Os07t0103500-01	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF250	UniProt:Q8LGZ9	SUPFAM:SSF51197	UniParc:UPI000009D049	RefSeq:XP_015645542.1
RefSeq:XP_015645543.1	RefSeq:XP_015645544.1	RefSeq:XP_015645545.1	RefSeq:XP_015645546.1	:	:

Description

GIBBERELLIN 2-OXIDASE 52OG-Fe(II) oxygenase domain containing protein. (Os07t0103500-01)

Coordinates

chr7:+:213778..219543

Molecular Weight (calculated)

38696.3 Da

IEP (calculated)

6.272

GRAVY (calculated)

-0.310

Length

341 amino acids

Sequence
(BLAST)

001: MEEHDYDSNS NPPLMSTYKH LFVEQHRLDM DMGAIDVDEC ELPVIDLAGL MEAEQVCRAD MVRAASEWGF FQVTNHGVPQ ALLRELHDAQ VAVFRRPFQE
101: KVTERLLGFS PESYRWGTPT AKCLEQLSWS EAYHIPMTTP RPSTSIRARA VIEEVSRAMY ELAQKLAEIL MRGLPGAGEG ETMVTTREET CFLRLNRYPP
201: CAMAMGGFGL CPHTDSDLLT IVHQQQDTVG GLQLLKGGRW VAVKPSPSTL IVNVGDLLQA WSNDVYKSVE HRVMANATLE RFSMAFFLCP SYHTLIIPSS
301: SHVHDDDAHY RSFTFGEYRK QIMEDVRSTG RKIGLHRFRT R

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.