Factsheet for VIT_01s0010g01650.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

plastid 1
mitochondrion 2
peroxisome 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29245	Soybean	cytosol	61.71	66.27
PGSC0003DMT400068810	Potato	cytosol	60.61	66.07
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	60.33	63.66
GSMUA_Achr9P21260_001	Banana	cytosol	57.02	62.54
TraesCS6B01G259200.1	Wheat	cytosol	59.78	62.54
TraesCS6D01G213100.1	Wheat	cytosol	59.5	62.25
TraesCS6A01G221900.1	Wheat	cytosol	59.23	61.96
Solyc04g008670.1.1	Tomato	golgi	59.78	60.78
Zm00001d017294_P001	Maize	cytosol	58.68	59.0
HORVU4Hr1G072540.2	Barley	mitochondrion	50.96	58.36
TraesCS2D01G375300.1	Wheat	cytosol	56.47	56.94
TraesCS2A01G379000.1	Wheat	cytosol	56.47	56.47
TraesCS2B01G396000.1	Wheat	cytosol	55.92	55.92
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	61.16	54.81
TraesCS4B01G376100.1	Wheat	cytosol	51.79	54.81
TraesCS4B01G272100.1	Wheat	cytosol, peroxisome, plastid	55.1	54.64
Os04t0522500-01	Rice	cytosol	53.72	54.47
KXG30679	Sorghum	cytosol	57.3	54.45
VIT_10s0116g00410.t01	Wine grape	cytosol, nucleus, peroxisome	51.24	54.07
TraesCS4A01G033200.1	Wheat	cytosol, nucleus, peroxisome	54.55	53.95
TraesCS4D01G271300.1	Wheat	cytosol, nucleus, peroxisome	54.55	53.95
Zm00001d002999_P001	Maize	cytosol, peroxisome, plastid	53.72	53.87
KXG26736	Sorghum	cytosol, peroxisome, plastid	54.27	53.24
TraesCS4B01G376200.1	Wheat	cytosol	51.52	52.82
Os02t0630300-01	Rice	cytosol	43.25	52.51
TraesCS5A01G543100.1	Wheat	cytosol	51.52	52.38
Os07t0103500-01	Rice	cytosol	47.11	50.15
VIT_19s0177g00020.t01	Wine grape	plastid	30.3	49.33
Zm00001d018617_P001	Maize	cytosol	47.38	48.59
EER95722	Sorghum	cytosol	47.38	48.04
VIT_19s0177g00030.t01	Wine grape	vacuole	48.48	47.96
HORVU2Hr1G090030.4	Barley	peroxisome	38.57	39.0
VIT_06s0004g06790.t01	Wine grape	cytosol	32.23	34.72
VIT_16s0050g00640.t01	Wine grape	nucleus, peroxisome, vacuole	27.82	31.17
VIT_02s0025g03440.t01	Wine grape	cytosol, nucleus, peroxisome	26.72	30.22
VIT_15s0046g02550.t01	Wine grape	cytosol, nucleus, peroxisome	25.34	28.05

Protein Annotations

EntrezGene:100854674	wikigene:100854674	Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:AM457326	ProteinID:CAN72288
ProteinID:CAN72288.1	ProteinID:CCB51200	ProteinID:CCB51200.1	InterPro:DIOX_N	UniProt:F6HG07	EMBL:FN595754
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EntrezGene:LOC100854674
wikigene:LOC100854674	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF177	SUPFAM:SSF51197	UniParc:UPI0002109613	ArrayExpress:VIT_01s0010g01650	EnsemblPlantsGene:VIT_01s0010g01650	EnsemblPlants:VIT_01s0010g01650.t01
RefSeq:XP_003631313	RefSeq:XP_003631313.1	:	:	:	:

Description

No Description!

Coordinates

chr1:-:17965019..17969123

Molecular Weight (calculated)

41123.9 Da

IEP (calculated)

5.818

GRAVY (calculated)

-0.326

Length

363 amino acids

Sequence
(BLAST)

001: MDQTATCCSS VFGRHTIVHF RRTMTNSNPP LLQHYGVLCQ HGETPAVQQR DCGNNGAAME ECQLPLIDLE GLWSESEEER LACASAIGRA SSKWGFFQVV
101: NHGIRPELLS EMRREQVKLF ETPFERKAAC QLLDNSYRWG TPTATCPKEL SWSEAFHIPL TKVSEEACYG EFCSLREVMQ EFAKAMSNLA RLLAGVLAES
201: LGHQKGVFDE ICDENTCFLR LNRYPPCPVS PEVFGLVPHT DSDFLTILYQ DEVGGLQLMK DSKWVAVKPN KDTLIVNIGD LFQAWSNNEY KSVEHQVMAN
301: AIKERYSIAY FLCPSYDAFI GSCSEPTIYR KFTFGEYRQQ VQEDVKKTGH KVGLPRFLLQ TTQ

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.