Factsheet for VIT_19s0177g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 6
plasma membrane 3
golgi 3
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0116g00410.t01	Wine grape	cytosol, nucleus, peroxisome	55.86	59.59
KRH22245	Soybean	cytosol, nucleus, peroxisome	49.86	57.37
VIT_19s0177g00020.t01	Wine grape	plastid	34.33	56.5
KRH57748	Soybean	cytosol, nucleus, peroxisome	49.86	56.13
KRH27091	Soybean	cytosol	48.77	55.42
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	47.41	53.37
KRH04670	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.77	51.73
KRH27095	Soybean	cytosol, nucleus, peroxisome	46.87	50.89
KRH22241	Soybean	cytosol, nucleus, peroxisome	46.59	50.74
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	47.96	50.72
KRH04189	Soybean	cytosol, nucleus, peroxisome	47.68	50.29
KRH57481	Soybean	cytosol	10.08	49.33
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	47.96	48.48
CDY35579	Canola	cytosol, nucleus, peroxisome	30.52	44.98
AT1G50960.1	Thale cress	plastid	38.69	42.26
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	47.68	41.87
VIT_06s0004g06790.t01	Wine grape	cytosol	31.34	34.12
VIT_16s0050g00640.t01	Wine grape	nucleus, peroxisome, vacuole	25.89	29.32
VIT_15s0046g02550.t01	Wine grape	cytosol, nucleus, peroxisome	25.61	28.66
VIT_02s0025g03440.t01	Wine grape	cytosol, nucleus, peroxisome	24.8	28.35
CDY35580	Canola	plastid	4.63	26.56
CDY29619	Canola	plastid	37.33	18.64
Bra030461.1-P	Field mustard	plastid	37.33	18.22

Protein Annotations

EntrezGene:100258946	wikigene:100258946	Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:AM449844	ProteinID:CAN72091
ProteinID:CAN72091.1	ProteinID:CCB48794	ProteinID:CCB48794.1	InterPro:DIOX_N	UniProt:F6H9A1	EMBL:FN595498
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EntrezGene:LOC100258946
wikigene:LOC100258946	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF248	SUPFAM:SSF51197	SignalP:SignalP-noTM	UniParc:UPI000210A3B4	ArrayExpress:VIT_19s0177g00030	EnsemblPlantsGene:VIT_19s0177g00030
EnsemblPlants:VIT_19s0177g00030.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr19:-:5864515..5868916

Molecular Weight (calculated)

42223.6 Da

IEP (calculated)

6.576

GRAVY (calculated)

-0.243

Length

367 amino acids

Sequence
(BLAST)

001: MTAALLGLLL LNVLWCAHGR YYVYDQIMTD QPLRKPVRME SEPPFGEFVN SVFGNIVEQE ETEAKFDVDE CELPLIDLGH LNLGNLEHEE CKRKICEAST
101: EWGFFQIVNH GVSKEILSRI HREQVELFRQ PFQIKTNEKL LNLSSGCYRW GTQTAITQKQ FAWSEAFHIP LSTIFQLSEF EGLRSSLQEF AIKASDLAQQ
201: IAKILAENLG CKSTFFFKNC LPSSCYIRMN RYPACPVSSK VFGLIPHTDS DFLTVLHQDQ VGGLQLLKDG KWIRVKPNPD ALVINIGDLF QAWSNGVYKS
301: LEHRVVANHE IERFSFAYFL CPSHDTVIQS CCEPSIYRKF SFREYRQQVE EDVKTTGDKV GLSRFRR

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.