CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57748	Soybean	cytosol, nucleus, peroxisome	72.0	16.56
KRH22245	Soybean	cytosol, nucleus, peroxisome	68.0	15.99
KRH27091	Soybean	cytosol	68.0	15.79
KRH04670	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.67	15.32
VIT_19s0177g00020.t01	Wine grape	plastid	44.0	14.8
KRH04189	Soybean	cytosol, nucleus, peroxisome	68.0	14.66
KRH22241	Soybean	cytosol, nucleus, peroxisome	58.67	13.06
CDY35579	Canola	cytosol, nucleus, peroxisome	42.67	12.85
KRH27095	Soybean	cytosol, nucleus, peroxisome	57.33	12.72
KRH29245	Soybean	cytosol	53.33	11.83
KRH27598	Soybean	cytosol, nucleus, peroxisome	49.33	10.91
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	46.67	10.74
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	48.0	10.37
KRG91226	Soybean	cytosol, nucleus, peroxisome	49.33	10.11
VIT_19s0177g00030.t01	Wine grape	vacuole	49.33	10.08
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	52.0	9.63
AT1G50960.1	Thale cress	plastid	42.67	9.52
KRH65048	Soybean	cytosol, nucleus, peroxisome	38.67	9.09
KRH40458	Soybean	cytosol, nucleus, peroxisome	37.33	8.78
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	40.0	7.18
KRH30278	Soybean	cytosol	33.33	7.04
KRG98268	Soybean	cytosol	32.0	6.76
CDY29619	Canola	plastid	45.33	4.63
Bra030461.1-P	Field mustard	plastid	45.33	4.52
KRH40460	Soybean	cytosol	4.0	1.89
CDY35580	Canola	plastid	1.33	1.56

Protein Annotations

EMBL:ACUP02002840	EnsemblPlants:KRH57481	EnsemblPlantsGene:GLYMA_05G063300	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF248	PFAM:PF03171	ProteinID:KRH57481
ProteinID:KRH57481.1	SUPFAM:SSF51197	UniParc:UPI00029530A5	UniProt:K7KN69	MapMan:50.1.13	:

Description

hypothetical protein

Coordinates

chr5:-:6061647..6066992

Molecular Weight (calculated)

8245.0 Da

IEP (calculated)

9.252

GRAVY (calculated)

-0.215

Length

75 amino acids

Sequence
(BLAST)

1: MQIAHPHTKP SSNKAQVHGL LPHSDTSFVT IVHEDHVGGL QLMKDGKWVG VKPNPQALVV NIADFFQPIK LVSEK

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.