CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40458	Soybean	cytosol, nucleus, peroxisome	91.19	45.45
KRH65048	Soybean	cytosol, nucleus, peroxisome	67.3	33.54
VIT_15s0046g02550.t01	Wine grape	cytosol, nucleus, peroxisome	57.23	27.74
PGSC0003DMT400000488	Potato	cytosol	55.35	27.41
GSMUA_Achr1P03100_001	Banana	cytosol	45.91	22.96
AT4G23340.1	Thale cress	cytosol, nucleus, peroxisome	46.54	22.84
CDY10932	Canola	cytosol, nucleus, peroxisome	46.54	22.77
CDX94181	Canola	cytosol, nucleus, peroxisome	45.91	22.46
KRH29245	Soybean	cytosol	23.9	11.24
KRH27598	Soybean	cytosol, nucleus, peroxisome	21.38	10.03
KRH30278	Soybean	cytosol	21.38	9.58
KRG98268	Soybean	cytosol	20.75	9.3
KRG91226	Soybean	cytosol, nucleus, peroxisome	21.38	9.29
KRH57748	Soybean	cytosol, nucleus, peroxisome	18.87	9.2
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	23.27	9.14
KRH04189	Soybean	cytosol, nucleus, peroxisome	19.5	8.91
KRH22245	Soybean	cytosol, nucleus, peroxisome	17.61	8.78
KRH27091	Soybean	cytosol	17.61	8.67
KRH27095	Soybean	cytosol, nucleus, peroxisome	18.24	8.58
KRH04670	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.61	8.09
KRH22241	Soybean	cytosol, nucleus, peroxisome	16.98	8.01
Solyc01g094590.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	8.81	6.45
Bra019310.1-P	Field mustard	cytosol	5.03	4.32
KRH57481	Soybean	cytosol	1.89	4.0

Protein Annotations

EMBL:ACUP02006038	EnsemblPlants:KRH40460	EnsemblPlantsGene:GLYMA_09G259800	Gene3D:2.60.120.330	InterPro:DIOX_N	InterPro:IPNS-like
InterPro:IPR027443	PANTHER:PTHR10209	PANTHER:PTHR10209:SF212	PFAM:PF14226	ProteinID:KRH40460	ProteinID:KRH40460.1
SEG:seg	SUPFAM:SSF51197	UniParc:UPI0006ED6727	UniProt:A0A0R0IDK3	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr9:-:47834147..47834976

Molecular Weight (calculated)

17935.8 Da

IEP (calculated)

8.764

GRAVY (calculated)

0.014

Length

159 amino acids

Sequence
(BLAST)

001: MSNTKSHAGT PILDLSQPLQ PCSLSSLYNA SKDWGLFHII NYGISKDLCS QIQTLSKHLF TLPSKTKLRL GPLSSLNSYT PLFIASPFFE SLRVNGPNFY
101: VSADNSAEIL FDKKDSKFSV IIQEYCSKME DLSKKILKLV LITTYIDIKV IYIIDNYLN

Best Arabidopsis Sequence Match ( AT5G51310.1 )
(BLAST)

001: MSLELPVFDI SKPLSESSLT SLQDACKEWG FFYVTNHGVS RDMYKKLRRF STGVFELEDE EKMKMGASNY TPRFIASPFF ESLRVSGPDF YASAKSSVDA
101: FSDQATDEEF SGLMKEYGEK MTKLCEKIMK AILSSFGDDL HHKYYESEFG NCHGYFRINN YTIPSDQEDD HHNGDEQDLI EGLGMHTDMS CITIVDQDDI
201: GGLQVRTRDG IGLMDINPKD EALVVNVGDL LHAWTNGRLR SSQHRVILKR RGFVGNRFSL AFFWCFDDGK VVFAPDEVVG GCEGMRVFRS FKCGDYLRFR
301: ESNEKGKFEK VGDTVEDFAR IEDRR

Arabidopsis Description

Gibberellin 20-oxidase-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KBY0]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.