CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27091	Soybean	cytosol	92.48	91.33
KRH57748	Soybean	cytosol, nucleus, peroxisome	81.19	79.45
KRH04670	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	81.5	75.14
KRH04189	Soybean	cytosol, nucleus, peroxisome	80.25	73.56
KRH57481	Soybean	cytosol	15.99	68.0
KRH27095	Soybean	cytosol, nucleus, peroxisome	68.03	64.2
KRH22241	Soybean	cytosol, nucleus, peroxisome	67.71	64.09
KRH27598	Soybean	cytosol, nucleus, peroxisome	56.11	52.8
VIT_19s0177g00030.t01	Wine grape	vacuole	57.37	49.86
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	49.84	48.77
KRH29245	Soybean	cytosol	50.78	47.93
CDY35579	Canola	cytosol, nucleus, peroxisome	36.99	47.39
KRG91226	Soybean	cytosol, nucleus, peroxisome	53.29	46.45
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	49.22	45.24
VIT_19s0177g00020.t01	Wine grape	plastid	31.03	44.39
AT1G50960.1	Thale cress	plastid	46.4	44.05
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	51.1	40.25
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	47.02	35.89
KRH30278	Soybean	cytosol	33.54	30.14
KRG98268	Soybean	cytosol	32.92	29.58
KRH65048	Soybean	cytosol, nucleus, peroxisome	26.33	26.33
KRH40458	Soybean	cytosol, nucleus, peroxisome	25.39	25.39
CDY35580	Canola	plastid	4.7	23.44
CDY29619	Canola	plastid	43.57	18.91
Bra030461.1-P	Field mustard	plastid	43.57	18.48
KRH40460	Soybean	cytosol	8.78	17.61

Protein Annotations

EntrezGene:100786176	Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:ACUP02008398	ncoils:Coil	InterPro:DIOX_N
EnsemblPlantsGene:GLYMA_13G288000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	UniProt:I1M3J2	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	EnsemblPlants:KRH22245	ProteinID:KRH22245	ProteinID:KRH22245.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF248	SUPFAM:SSF51197	UniParc:UPI000233BD63

Description

hypothetical protein

Coordinates

chr13:-:38835713..38839495

Molecular Weight (calculated)

36894.4 Da

IEP (calculated)

9.073

GRAVY (calculated)

-0.321

Length

319 amino acids

Sequence
(BLAST)

001: MAYEPPFLET YKTLVQQHLG DSRNEFIVER CDIPLIDLGR LSLEREECMR EIAEAAREWG FFQVVNHGIS HELLKSLQIE QKKVFYQPFL NKSSTQGKAY
101: RWGNPFATNL RQLSWSEAFH FYLTDISRMD QHETLRSSLE VFAITMFSLA QSLAEILVCK LNTKSNYFRE HCLPKSSFIR LNRYPQCPIS SKVHGLLPHS
201: DTSFLTIVHQ DQVGGLQLLK DGKWVGVKPN PHALVVNIGD LFQALSNGVY KSIKHRVVAA EKVERFSMAF FYSPSEEAII QSQIKPPIYR KFTLREYRQQ
301: TEKDVKQTGD KVGLSRFLL

Best Arabidopsis Sequence Match ( AT1G50960.1 )
(BLAST)

001: MASQPPFKTN FCSIFGSSFP NSTSESNTNT STIQTSGIKL PVIDLSHLTS GEEVKRKRCV KQMVAAAKEW GFFQIVNHGI PKDVFEMMLL EEKKLFDQPF
101: SVKVRERFSD LSKNSYRWGN PSATSPAQYS VSEAFHIILS EVSRISDDRN NLRTIVETYV QEIARVAQMI CEILGKQVNV SSEYFENIFE LENSFLRLNK
201: YHPSVFGSEV FGLVPHTDTS FLTILSQDQI GGLELENNGQ WISVKPCLEA LTVNIGDMFQ ALSNGVYQSV RHRVISPANI ERMSIAFFVC PYLETEIDCF
301: GYPKKYRRFS FREYKEQSEH DVKETGDKVG LSRFLI

Arabidopsis Description

GA2OX7Gibberellin 2-beta-dioxygenase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6I4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.