CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91226	Soybean	cytosol, nucleus, peroxisome	74.93	69.4
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	56.34	58.59
KRH22245	Soybean	cytosol, nucleus, peroxisome	52.8	56.11
KRH27091	Soybean	cytosol	53.1	55.73
KRH57748	Soybean	cytosol, nucleus, peroxisome	53.39	55.52
KRH29245	Soybean	cytosol	53.69	53.85
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	53.69	52.45
KRH27095	Soybean	cytosol, nucleus, peroxisome	51.62	51.78
KRH04670	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.8	51.73
KRH22241	Soybean	cytosol, nucleus, peroxisome	51.33	51.63
KRH04189	Soybean	cytosol, nucleus, peroxisome	51.03	49.71
KRH57481	Soybean	cytosol	10.91	49.33
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	56.05	45.45
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	53.39	44.69
KRH30278	Soybean	cytosol	33.92	32.39
KRG98268	Soybean	cytosol	31.86	30.42
KRH65048	Soybean	cytosol, nucleus, peroxisome	25.96	27.59
KRH40458	Soybean	cytosol, nucleus, peroxisome	25.66	27.27
KRH40460	Soybean	cytosol	10.03	21.38

Protein Annotations

EntrezGene:100793548	Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:ACUP02006729	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_11G003200
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	UniProt:I1LFR2	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
ProteinID:KRH27597.1	EnsemblPlants:KRH27598	ProteinID:KRH27598	ProteinID:KRH27598.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF386	SUPFAM:SSF51197	UniParc:UPI000233C3E0

Description

hypothetical protein

Coordinates

chr11:-:197383..205041

Molecular Weight (calculated)

38816.0 Da

IEP (calculated)

6.245

GRAVY (calculated)

-0.381

Length

339 amino acids

Sequence
(BLAST)

001: MESISDPPFH EAYKILFDKT RNGNNFEEHK ELLAVAEECD LPVIDLSRLE ESDEVVREEC KSQIARASQE WGFFQVVNHG ISTEIFSSLR CEQEKVFKQP
101: FEKKTKEDKF LNFSAGSYRW GTPSATCIKQ LSWSEAFHIP LTDILGSTGS NSLSWTIEQF ATTVSSLAQT LADILAEKMG HKSTFFKENC LPNTCYLRLN
201: RYPPCPIGFG IHGLMPHTDS DFLTILYQDQ VGGLQLVKDS KWIAVKPNPD ALIINIGDLF QAWSNGVYKS VEHRVMTNPK LERFSMAYFF CPSNDTVIES
301: CREPSFYRKF SFREYRQQVR DDVQKLGSKI GLPRFLTHA

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.