CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27598	Soybean	cytosol, nucleus, peroxisome	69.4	74.93
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	48.09	53.99
KRH27091	Soybean	cytosol	47.54	53.87
KRH57748	Soybean	cytosol, nucleus, peroxisome	47.81	53.68
KRH22245	Soybean	cytosol, nucleus, peroxisome	46.45	53.29
KRH29245	Soybean	cytosol	46.99	50.89
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	47.54	50.14
KRH57481	Soybean	cytosol	10.11	49.33
KRH04670	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.45	49.13
KRH22241	Soybean	cytosol, nucleus, peroxisome	45.08	48.96
KRH04189	Soybean	cytosol, nucleus, peroxisome	46.17	48.56
KRH27095	Soybean	cytosol, nucleus, peroxisome	44.81	48.52
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	50.82	44.5
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	47.27	42.72
KRH30278	Soybean	cytosol	29.51	30.42
KRH65048	Soybean	cytosol, nucleus, peroxisome	25.14	28.84
KRG98268	Soybean	cytosol	27.6	28.45
KRH40458	Soybean	cytosol, nucleus, peroxisome	23.5	26.96
KRH40460	Soybean	cytosol	9.29	21.38

Protein Annotations

EntrezGene:100792172	Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:ACUP02012669	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_20G141200
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	UniProt:I1NG95	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
EnsemblPlants:KRG91226	ProteinID:KRG91226	ProteinID:KRG91226.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF386	SUPFAM:SSF51197	UniParc:UPI000233DD57	SEG:seg

Description

hypothetical protein

Coordinates

chr20:-:37988762..37993266

Molecular Weight (calculated)

41577.5 Da

IEP (calculated)

6.435

GRAVY (calculated)

-0.321

Length

366 amino acids

Sequence
(BLAST)

001: MPTNKLNMEH SISNPPLHEA YKILLSKTNG ENGFDDQFLV EECELPLIDV SRLAESGDEV RREECKSEIF KASQEWGFFQ VVKHGISNGV FSGLKLEQEK
101: IFKQPFEKKT KENKFFNFSA GSYRWGSLNA TCIRQLSWSE AFHIPLTDML GSGGSDTFSA TIQQFATQVS ILSKTLADIL AEKMGHKSTF FEENCLPRSC
201: YIRLNRYPPC PLASEVHGLM PHTDSAFLTI LHQDQVRGLQ MLKDGKWIAV KPNPDALIII IGDLFQAWSN GVYKSVEHRV VTNPKLERFS VAYFFCPSDD
301: TVIESCSTEP SLYRNFSFGE YRQQVREDVH NLGYKIGLPK FLLSTGDKIV CMNMYHEFNF PTSTGT

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.