CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57748	Soybean	cytosol, nucleus, peroxisome	78.45	83.74
KRH04670	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	79.89	80.35
KRH22245	Soybean	cytosol, nucleus, peroxisome	73.56	80.25
KRH27091	Soybean	cytosol	72.99	78.64
KRH57481	Soybean	cytosol	14.66	68.0
KRH22241	Soybean	cytosol, nucleus, peroxisome	59.77	61.72
KRH27095	Soybean	cytosol, nucleus, peroxisome	59.48	61.24
KRH27598	Soybean	cytosol, nucleus, peroxisome	49.71	51.03
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	45.98	49.08
VIT_19s0177g00030.t01	Wine grape	vacuole	50.29	47.68
KRH29245	Soybean	cytosol	46.26	47.63
CDY35579	Canola	cytosol, nucleus, peroxisome	33.62	46.99
KRG91226	Soybean	cytosol, nucleus, peroxisome	48.56	46.17
AT1G50960.1	Thale cress	plastid	44.25	45.83
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	45.69	45.82
VIT_19s0177g00020.t01	Wine grape	plastid	27.59	43.05
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	45.98	39.51
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	42.24	35.17
KRH30278	Soybean	cytosol	32.18	31.55
KRG98268	Soybean	cytosol	30.17	29.58
CDY35580	Canola	plastid	5.17	28.12
KRH65048	Soybean	cytosol, nucleus, peroxisome	25.29	27.59
KRH40458	Soybean	cytosol, nucleus, peroxisome	23.56	25.71
KRH40460	Soybean	cytosol	8.91	19.5
CDY29619	Canola	plastid	40.23	19.05
Bra030461.1-P	Field mustard	plastid	40.23	18.62

Protein Annotations

EntrezGene:106796737	Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:ACUP02010387	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_17G145200
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:K7MLN5
EnsemblPlants:KRH04189	ProteinID:KRH04189	ProteinID:KRH04189.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF248	SUPFAM:SSF51197	UniParc:UPI000294A30A	:

Description

hypothetical protein

Coordinates

chr17:-:11890737..11895143

Molecular Weight (calculated)

39908.6 Da

IEP (calculated)

8.711

GRAVY (calculated)

-0.446

Length

348 amino acids

Sequence
(BLAST)

001: MKSVKCHNPL QSKHSSQMDC EPPFLETYKT LVQKHVEDSK NIDSSSLLER SGELPLIDLG RLNGERDECV KEIAEAASKW GFFQVVNHGI SQELLERLQF
101: EQKKLFYQPF INKSAQVNLS SLSAKSYRWG NPFATNLRQL SWSEAFHFSP TDISRMDQHQ CLRLSLEAFT TRMFPLAESL AEILTCKLMN TKSNYFQENC
201: LPKSSFIRLN RYPSCPISSK VHGLLPHSDT SFLTIVHQGH VRGLQLMKDG KWVDVKPNPQ ALVVNIGDFF QAFSNGVYKS IQHRVVAAEK AERFSIAFFY
301: CPSEEAIIES QINPATYRKF TLREYRQQTE KDVKQTGDKV GLSRFLHS

Best Arabidopsis Sequence Match ( AT1G50960.1 )
(BLAST)

001: MASQPPFKTN FCSIFGSSFP NSTSESNTNT STIQTSGIKL PVIDLSHLTS GEEVKRKRCV KQMVAAAKEW GFFQIVNHGI PKDVFEMMLL EEKKLFDQPF
101: SVKVRERFSD LSKNSYRWGN PSATSPAQYS VSEAFHIILS EVSRISDDRN NLRTIVETYV QEIARVAQMI CEILGKQVNV SSEYFENIFE LENSFLRLNK
201: YHPSVFGSEV FGLVPHTDTS FLTILSQDQI GGLELENNGQ WISVKPCLEA LTVNIGDMFQ ALSNGVYQSV RHRVISPANI ERMSIAFFVC PYLETEIDCF
301: GYPKKYRRFS FREYKEQSEH DVKETGDKVG LSRFLI

Arabidopsis Description

GA2OX7Gibberellin 2-beta-dioxygenase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6I4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.