CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	secretory
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57748	Soybean	cytosol, nucleus, peroxisome	85.84	91.1
KRH22245	Soybean	cytosol, nucleus, peroxisome	75.14	81.5
KRH04189	Soybean	cytosol, nucleus, peroxisome	80.35	79.89
KRH27091	Soybean	cytosol	73.7	78.95
KRH57481	Soybean	cytosol	15.32	70.67
KRH27095	Soybean	cytosol, nucleus, peroxisome	63.29	64.79
KRH22241	Soybean	cytosol, nucleus, peroxisome	62.72	64.39
KRH27598	Soybean	cytosol, nucleus, peroxisome	51.73	52.8
VIT_19s0177g00030.t01	Wine grape	vacuole	51.73	48.77
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	45.66	48.47
CDY35579	Canola	cytosol, nucleus, peroxisome	34.1	47.39
KRH29245	Soybean	cytosol	46.24	47.34
KRG91226	Soybean	cytosol, nucleus, peroxisome	49.13	46.45
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	44.8	44.67
AT1G50960.1	Thale cress	plastid	43.06	44.35
VIT_19s0177g00020.t01	Wine grape	plastid	28.03	43.5
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	46.53	39.75
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	42.49	35.17
KRH30278	Soybean	cytosol	32.37	31.55
KRG98268	Soybean	cytosol	30.64	29.86
KRH65048	Soybean	cytosol, nucleus, peroxisome	25.43	27.59
CDY35580	Canola	plastid	4.91	26.56
KRH40458	Soybean	cytosol, nucleus, peroxisome	23.7	25.71
CDY29619	Canola	plastid	40.46	19.05
Bra030461.1-P	Field mustard	plastid	40.46	18.62
KRH40460	Soybean	cytosol	8.09	17.61

Protein Annotations

EntrezGene:106796618	Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:ACUP02010473	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_17G178300
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:K7MM91
EnsemblPlants:KRH04670	ProteinID:KRH04670	ProteinID:KRH04670.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF248	SUPFAM:SSF51197	UniParc:UPI000294D69A	:

Description

hypothetical protein

Coordinates

chr17:-:19289887..19295162

Molecular Weight (calculated)

40052.6 Da

IEP (calculated)

8.425

GRAVY (calculated)

-0.413

Length

346 amino acids

Sequence
(BLAST)

001: MFPSNLSIWL VLFSYNSQMD YEPPFLETYK TLVLNHLDDS KNEYSSLVER SCELPVIDLG QFNGERDKCM KEIAEAASKW GFFQVVNHGI SQELLKSLEF
101: EQKKLFYQPF LNKSEKFNFS SLSAKTYRWG NPYATNLRQL SWSEAFHFYA SDISWMDQHQ SLRSSLESFA TRMFPLAESL AEVLAYKLNT KSNYFRENCL
201: PKSSYIRLNR YPPCPISSKV HGLLPHSDTS FLTIVHQDQV GGLQLMKDGK WVGVKPNPQA LVVNIGDFFQ AFSNGVYKSI KHRVVAAEKV ERFSMAFFYC
301: PSEDALIESH IKPATYRKFT SREFRQQTEK DVKQTGDKEG LSRFLL

Best Arabidopsis Sequence Match ( AT1G50960.1 )
(BLAST)

001: MASQPPFKTN FCSIFGSSFP NSTSESNTNT STIQTSGIKL PVIDLSHLTS GEEVKRKRCV KQMVAAAKEW GFFQIVNHGI PKDVFEMMLL EEKKLFDQPF
101: SVKVRERFSD LSKNSYRWGN PSATSPAQYS VSEAFHIILS EVSRISDDRN NLRTIVETYV QEIARVAQMI CEILGKQVNV SSEYFENIFE LENSFLRLNK
201: YHPSVFGSEV FGLVPHTDTS FLTILSQDQI GGLELENNGQ WISVKPCLEA LTVNIGDMFQ ALSNGVYQSV RHRVISPANI ERMSIAFFVC PYLETEIDCF
301: GYPKKYRRFS FREYKEQSEH DVKETGDKVG LSRFLI

Arabidopsis Description

GA2OX7Gibberellin 2-beta-dioxygenase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6I4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.