CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27095	Soybean	cytosol, nucleus, peroxisome	92.28	92.01
KRH22245	Soybean	cytosol, nucleus, peroxisome	64.09	67.71
KRH57748	Soybean	cytosol, nucleus, peroxisome	64.39	66.56
KRH27091	Soybean	cytosol	62.91	65.63
KRH04670	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.39	62.72
KRH04189	Soybean	cytosol, nucleus, peroxisome	61.72	59.77
KRH57481	Soybean	cytosol	13.06	58.67
KRH27598	Soybean	cytosol, nucleus, peroxisome	51.63	51.33
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	47.48	49.08
KRH29245	Soybean	cytosol	48.37	48.22
CDY35579	Canola	cytosol, nucleus, peroxisome	34.72	46.99
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	48.07	46.69
VIT_19s0177g00030.t01	Wine grape	vacuole	50.74	46.59
VIT_19s0177g00020.t01	Wine grape	plastid	30.56	46.19
KRG91226	Soybean	cytosol, nucleus, peroxisome	48.96	45.08
AT1G50960.1	Thale cress	plastid	42.14	42.26
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	48.37	40.25
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	46.29	37.32
KRH30278	Soybean	cytosol	32.34	30.7
KRG98268	Soybean	cytosol	32.05	30.42
KRH65048	Soybean	cytosol, nucleus, peroxisome	25.82	27.27
KRH40458	Soybean	cytosol, nucleus, peroxisome	24.63	26.02
CDY35580	Canola	plastid	4.45	23.44
CDY29619	Canola	plastid	40.36	18.5
Bra030461.1-P	Field mustard	plastid	40.36	18.09
KRH40460	Soybean	cytosol	8.01	16.98

Protein Annotations

EntrezGene:100805270	Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:ACUP02008398	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_13G287600
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	UniProt:I1M3J1	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
EnsemblPlants:KRH22241	ProteinID:KRH22241	ProteinID:KRH22241.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF248	SUPFAM:SSF51197	UniParc:UPI000233BAD9	:

Description

hypothetical protein

Coordinates

chr13:-:38798562..38802911

Molecular Weight (calculated)

38346.9 Da

IEP (calculated)

7.235

GRAVY (calculated)

-0.241

Length

337 amino acids

Sequence
(BLAST)

001: MDYEPPFLEF YKPLLLQGSH RVDVAISGGA IRNDKSEWCE LPLIDLGRLS LGGGGEKEEC MREISEAART WGFFQVVNHG VSQELLQSLR HQQVEVFRTP
101: FARKSQESFF NLPARSYRWG NPSATNLGQI SWSEAFHMFL PDIARMDQHQ SLRSTIEAFA SVVAPLAENL MQILAQKLNI KFNYFQENCS ANTSFLRLNR
201: YPPCPIFYSR VFGLLSHTDS SFLTIVNQDQ IGGLQIMKDG NWVGVKPNPQ ALVVNIGDLF QALSNDIYIS AKHRVVAAEK VERFSVAYFY NPSKDALIES
301: HIMPPMYRKF TFGEYRGQIE KDVKETGDKV GLSRFLL

Best Arabidopsis Sequence Match ( AT1G50960.1 )
(BLAST)

001: MASQPPFKTN FCSIFGSSFP NSTSESNTNT STIQTSGIKL PVIDLSHLTS GEEVKRKRCV KQMVAAAKEW GFFQIVNHGI PKDVFEMMLL EEKKLFDQPF
101: SVKVRERFSD LSKNSYRWGN PSATSPAQYS VSEAFHIILS EVSRISDDRN NLRTIVETYV QEIARVAQMI CEILGKQVNV SSEYFENIFE LENSFLRLNK
201: YHPSVFGSEV FGLVPHTDTS FLTILSQDQI GGLELENNGQ WISVKPCLEA LTVNIGDMFQ ALSNGVYQSV RHRVISPANI ERMSIAFFVC PYLETEIDCF
301: GYPKKYRRFS FREYKEQSEH DVKETGDKVG LSRFLI

Arabidopsis Description

GA2OX7Gibberellin 2-beta-dioxygenase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6I4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.