Factsheet for GSMUA_Achr9P21260_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	71.0	68.31
PGSC0003DMT400068810	Potato	cytosol	57.7	57.36
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	62.54	57.02
KRH29245	Soybean	cytosol	58.01	56.8
Solyc04g008670.1.1	Tomato	golgi	57.1	52.94
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	51.66	52.45
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	57.7	47.16
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	48.94	46.69
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	51.96	41.15
GSMUA_Achr10P...	Banana	mitochondrion	32.02	29.44
GSMUA_Achr1P03100_001	Banana	cytosol	27.19	28.3

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr9G21260_001
EnsemblPlants:GSMUA_Achr9P21260_001	EnsemblPlants:GSMUA_Achr9T21260_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0U285
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF177
SUPFAM:SSF51197	UniParc:UPI000296A1F3	:	:	:	:

Description

Gibberellin 2-beta-dioxygenase 8 [Source:GMGC_GENE;Acc:GSMUA_Achr9G21260_001]

Coordinates

chr9:+:26308679..26310286

Molecular Weight (calculated)

37557.7 Da

IEP (calculated)

6.399

GRAVY (calculated)

-0.373

Length

331 amino acids

Sequence
(BLAST)

001: MMCDPPFDRY RDLFTGSILQ RSQHEGRQVV EEHELPVIDL RSLRSENVEE RVSCVSEIVR ASSDWGFFQV LNHGVSNELL GEMSREQKRL FELPFEMKAS
101: AKLLNGSYRW GTPTAKSLDQ FSWSEAFHVP LAKISDPDCC SSEFGCLSDA MERLAGTMSE LARMLAGVLA ENLGSPGDQF TKSCSKSTCF LRLNRYPPCP
201: FSPETFGLMP HTDSDFLTIL HQDQVGGLQL RKDSKWIAVK PNPDALIVNI GDLFQAWSND VYKSVQHKVM TNTKVERYSV AYFLCPSNES TIGSCREPSV
301: YKKFTFGEFR RQVEEDVKRS GYKVGLPRFL L

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.