Factsheet for GSMUA_Achr10P13090_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002628.1-P	Field mustard	cytosol, nucleus, peroxisome	19.44	55.12
CDX80345	Canola	cytosol, nucleus, peroxisome	19.44	55.12
CDY52119	Canola	cytosol, nucleus, peroxisome	19.44	55.12
CDY32695	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	28.06	49.51
Zm00001d035994_P001	Maize	cytosol	42.78	45.83
VIT_06s0004g06790.t01	Wine grape	cytosol	42.5	45.4
KRG98268	Soybean	cytosol	43.89	44.51
KRH30278	Soybean	cytosol	43.33	43.94
HORVU3Hr1G117870.1	Barley	cytosol	39.17	43.79
AT5G58660.1	Thale cress	cytosol, nucleus, peroxisome	42.78	43.75
Os04t0407800-01	Rice	cytosol, nucleus, peroxisome	40.83	43.75
TraesCS3B01G603000.1	Wheat	cytosol	39.72	43.73
TraesCS3D01G542800.1	Wheat	cytosol	40.56	43.2
Bra020362.1-P	Field mustard	cytosol	41.67	43.1
OQU85872	Sorghum	cytosol	41.94	43.02
AT3G47190.1	Thale cress	cytosol	37.22	40.48
Solyc06g082030.2.1	Tomato	cytosol	39.17	39.94
CDY02826	Canola	cytosol	41.39	39.31
PGSC0003DMT400078051	Potato	cytosol	38.06	38.59
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	30.56	36.07
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	31.11	34.36
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	31.11	32.28
GSMUA_Achr9P21260_001	Banana	cytosol	29.44	32.02
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	29.44	30.81
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	33.33	28.71
GSMUA_Achr1P03100_001	Banana	cytosol	22.78	25.79

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr10G13090_001
EnsemblPlants:GSMUA_Achr10P13090_001	EnsemblPlants:GSMUA_Achr10T13090_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0RHT5
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF206
SUPFAM:SSF51197	UniParc:UPI000295CEF9	SEG:seg	:	:	:

Description

Putative Gibberellin 2-beta-dioxygenase 8 [Source:GMGC_GENE;Acc:GSMUA_Achr10G13090_001]

Coordinates

chr10:-:21898631..21900169

Molecular Weight (calculated)

40176.8 Da

IEP (calculated)

5.967

GRAVY (calculated)

-0.166

Length

360 amino acids

Sequence
(BLAST)

001: MQSPHLPLLH RRLLRPIVTT MESTKEEADV EDDQAAAADL SYPPVFLESR GAGRLPASLC TSAPVIDVPV LDLHRLDPVG LRGACRDWGL FRLVHHGIPP
101: PLSAALQAQA RDLLSLPFDA KRARFSSPGL AYFWGTPALT LHVKDLNWLE GLHIPLGRLS SSSSAAEFDG LETFWSLVDE YKQHMARIAR TLFEALAADL
201: KLDAWVSASY LNEHDGTFRI YRYPKCARAD DYFAMEAHTD SSVLSVVNQD DVGGLQVLRG GGWFCVEPIA DTLIVNLGDI MQASISFSES YKSVEHRVTV
301: NRSKERISLC YFGFPMEDGV ITSSRYREFT YREFKEQVQE DIKLSGAKVG LGRFKINNES

Best Arabidopsis Sequence Match ( AT5G58660.1 )
(BLAST)

001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.