Factsheet for HORVU3Hr1G117870.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G603000.1	Wheat	cytosol	78.57	77.37
TraesCS3D01G542800.1	Wheat	cytosol	78.88	75.15
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	61.8	65.25
Zm00001d035994_P001	Maize	cytosol	50.31	48.21
CDX80345	Canola	cytosol, nucleus, peroxisome	18.94	48.03
CDY52119	Canola	cytosol, nucleus, peroxisome	18.94	48.03
Bra002628.1-P	Field mustard	cytosol, nucleus, peroxisome	18.63	47.24
Os04t0407800-01	Rice	cytosol, nucleus, peroxisome	47.83	45.83
OQU85872	Sorghum	cytosol	49.69	45.58
CDY32695	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	26.71	42.16
GSMUA_Achr10P...	Banana	mitochondrion	43.79	39.17
VIT_06s0004g06790.t01	Wine grape	cytosol	40.37	38.58
KRG98268	Soybean	cytosol	38.82	35.21
AT5G58660.1	Thale cress	cytosol, nucleus, peroxisome	37.89	34.66
KRH30278	Soybean	cytosol	37.58	34.08
Bra020362.1-P	Field mustard	cytosol	36.65	33.91
Solyc06g082030.2.1	Tomato	cytosol	35.4	32.29
CDY02826	Canola	cytosol	36.96	31.4
PGSC0003DMT400078051	Potato	cytosol	34.47	31.27
HORVU4Hr1G072540.2	Barley	mitochondrion	29.81	30.28
AT3G47190.1	Thale cress	cytosol	29.5	28.7
HORVU2Hr1G090030.4	Barley	peroxisome	22.98	20.61

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:HORVU3Hr1G117870	EnsemblPlants:HORVU3Hr1G117870.1	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0UWW5
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF206
SUPFAM:SSF51197	UniParc:UPI000296E9B2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:699526584..699528082

Molecular Weight (calculated)

34794.3 Da

IEP (calculated)

5.017

GRAVY (calculated)

-0.129

Length

322 amino acids

Sequence
(BLAST)

001: MDRQPVECGL EEVELRAVDL EAEESILTEE LAAACRDPGV FRLVNHGVPS NLTARLLALA RGLLELDAAT KSRLPGYFCG TPALAALPVK EPNWLEGLHV
101: EAAGDTCLCS PDGGSAVAEF MEAVSGEYVA HMARIARKVF DTLASGELGL DSEQRATYLT ERGCIFRAYR YPAAAASGQV GMEAHTDSSV LSILNQDTVG
201: GLQVLYRGCW RAVRPVEGAL VVNVGDMLQA MSGDAYRSPE HRVVAPAGAD RMSLCYFAFP EEEAVIVGGR WRGRSSSGGE QRETRRYQGF SYREFREQVQ
301: ADVKATGSKV GLARFRVAVA QS

Best Arabidopsis Sequence Match ( AT5G58660.1 )
(BLAST)

001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.