Factsheet for Bra002628.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52119	Canola	cytosol, nucleus, peroxisome	94.49	94.49
Bra020362.1-P	Field mustard	cytosol	87.4	31.9
AT5G58660.1	Thale cress	cytosol, nucleus, peroxisome	83.46	30.11
Bra013512.1-P	Field mustard	cytosol	44.09	22.31
VIT_06s0004g06790.t01	Wine grape	cytosol	59.06	22.26
KRG98268	Soybean	cytosol	62.2	22.25
KRH30278	Soybean	cytosol	59.84	21.41
Bra019310.1-P	Field mustard	cytosol	30.71	21.08
GSMUA_Achr10P...	Banana	mitochondrion	55.12	19.44
Zm00001d035994_P001	Maize	cytosol	50.39	19.05
Os04t0407800-01	Rice	cytosol, nucleus, peroxisome	49.61	18.75
TraesCS3B01G603000.1	Wheat	cytosol	48.03	18.65
HORVU3Hr1G117870.1	Barley	cytosol	47.24	18.63
Solyc06g082030.2.1	Tomato	cytosol	51.18	18.41
TraesCS3D01G542800.1	Wheat	cytosol	47.24	17.75
PGSC0003DMT400078051	Potato	cytosol	49.61	17.75
OQU85872	Sorghum	cytosol	48.82	17.66
Bra020890.1-P	Field mustard	cytosol, nucleus, peroxisome	44.88	16.86
Bra038780.1-P	Field mustard	cytosol	44.09	16.57
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	25.2	10.49
Bra022544.1-P	Field mustard	cytosol, nucleus, peroxisome	23.62	9.32
Bra030461.1-P	Field mustard	plastid	35.43	5.98

Protein Annotations

EnsemblPlants:Bra002628.1	EnsemblPlants:Bra002628.1-P	EnsemblPlantsGene:Bra002628	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF206	PFAM:PF03171	PFscan:PS51471
SUPFAM:SSF51197	UniParc:UPI0002543753	UniProt:M4CEJ7	MapMan:50.1.13	:	:

Description

AT5G58660 (E=4e-058) | oxidoreductase, 2OG-Fe(II) oxygenase family protein

Coordinates

chrA10:+:8492759..8493215

Molecular Weight (calculated)

14749.7 Da

IEP (calculated)

7.571

GRAVY (calculated)

-0.488

Length

127 amino acids

Sequence
(BLAST)

001: MELHTDSSVI SILKEDETGG LEIMKGEEWL RVKPVADTLI INLGDMMQAI SDDEYKSVKH RVKKKDRTRE RHSVCYFVFP QRDCVIKSSN YKPFTYSEFE
101: AQVQADFQYL GTKVGLHRFS PKSPLFL

Best Arabidopsis Sequence Match ( AT5G58660.1 )
(BLAST)

001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.