Factsheet for Bra020890.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71106	Canola	cytosol	45.86	94.51
Bra038780.1-P	Field mustard	cytosol	89.64	89.64
AT4G21200.1	Thale cress	cytosol, nucleus, peroxisome	87.57	87.57
Bra013512.1-P	Field mustard	cytosol	48.52	65.34
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	53.85	55.83
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	51.78	50.43
Bra002628.1-P	Field mustard	cytosol, nucleus, peroxisome	16.86	44.88
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	52.66	42.58
Bra019310.1-P	Field mustard	cytosol	17.16	31.35
Bra020362.1-P	Field mustard	cytosol	30.77	29.89
Bra022544.1-P	Field mustard	cytosol, nucleus, peroxisome	26.04	27.33
Bra030461.1-P	Field mustard	plastid	38.46	17.29

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EnsemblPlantsGene:Bra020890	EnsemblPlants:Bra020890.1	EnsemblPlants:Bra020890.1-P	ncoils:Coil
InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009685	GO:GO:0009987	GO:GO:0016491	GO:GO:0046872	GO:GO:0052635
GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4DWJ6	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF386	SUPFAM:SSF51197
UniParc:UPI0002545C0F	SEG:seg	:	:	:	:

Description

AT4G21200 (E=4e-166) ATGA2OX8, GA2OX8 | GA2OX8 (GIBBERELLIN 2-OXIDASE 8); gibberellin 2-beta-dioxygenase

Coordinates

chrA08:-:11411249..11415849

Molecular Weight (calculated)

38894.3 Da

IEP (calculated)

8.187

GRAVY (calculated)

-0.463

Length

338 amino acids

Sequence
(BLAST)

001: MDPPFNETYK TLLYKQIKNT ENSVPQTPFS FHVTAVVEEV ELPLIDVSRL INGAKKEREK CKQDIASASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSTGSYRWGT PSATCVRQLS WSEAFHVPMT DISDNKYFTT LSSTMEKFAS ESEALAYSLA EVLAEKSGRK SSFFKKTCVR NTCYLRMNRY
201: PPCPNPSEVY GLMPHTDSDF LTILHQDQVG GLQLIKDNRW IAVKPNPRAL IINIGDLFQA WSNGMYKSVE HRVMTNPTVE RFSTAYFLCP SYDAVIECSG
301: DCPAYRNFSF GEFRQQVQED VKKLGYKVGL PRFINDIY

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.