Factsheet for TraesCS3B01G603000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G542800.1	Wheat	cytosol	86.24	83.43
HORVU3Hr1G117870.1	Barley	cytosol	77.37	78.57
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	68.5	73.44
Zm00001d035994_P001	Maize	cytosol	51.38	50.0
CDX80345	Canola	cytosol, nucleus, peroxisome	18.96	48.82
CDY52119	Canola	cytosol, nucleus, peroxisome	18.96	48.82
Os04t0407800-01	Rice	cytosol, nucleus, peroxisome	49.54	48.21
Bra002628.1-P	Field mustard	cytosol, nucleus, peroxisome	18.65	48.03
OQU85872	Sorghum	cytosol	49.54	46.15
CDY32695	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	26.91	43.14
VIT_06s0004g06790.t01	Wine grape	cytosol	41.28	40.06
GSMUA_Achr10P...	Banana	mitochondrion	43.73	39.72
AT5G58660.1	Thale cress	cytosol, nucleus, peroxisome	39.14	36.36
KRG98268	Soybean	cytosol	39.14	36.06
Bra020362.1-P	Field mustard	cytosol	37.31	35.06
KRH30278	Soybean	cytosol	37.61	34.65
CDY02826	Canola	cytosol	37.92	32.72
Solyc06g082030.2.1	Tomato	cytosol	34.56	32.01
PGSC0003DMT400078051	Potato	cytosol	33.95	31.27
TraesCS6B01G259200.1	Wheat	cytosol	31.8	29.97
AT3G47190.1	Thale cress	cytosol	29.97	29.61
TraesCS4B01G376100.1	Wheat	cytosol	30.28	28.86
TraesCS4B01G376200.1	Wheat	cytosol	31.19	28.81
TraesCS4B01G272100.1	Wheat	cytosol, peroxisome, plastid	31.8	28.42
TraesCS2B01G396000.1	Wheat	cytosol	31.5	28.37

Protein Annotations

EnsemblPlants:TraesCS3B01G603000.1	EnsemblPlantsGene:TraesCS3B01G603000	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF206	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PRINTS:PR00682	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr3B:-:822819355..822820338

Molecular Weight (calculated)

35362.7 Da

IEP (calculated)

4.720

GRAVY (calculated)

-0.155

Length

327 amino acids

Sequence
(BLAST)

001: MEQLADGCEL EELELPTVDL EAEESRLTEQ LAAACRDPGV FRLVNHGVPC ELTARLFGLA RGLLELDAAN KSRLPGYFCG TPALAALPVK EINWLEGLHV
101: EATAAHGDRS HSSPDGADGE ADGTAFSKFR EAVSGEYVAH MARIARKLFD ALAAGELGLD SEQRASYLTE RGSIFRAYRY PASGAGRRQL GMEAHTDSSV
201: LSILNQDMVG GLQVFYGGRW LAVRPVEGAV VVNVGDMLQA MSGDAYRSPE HRVVAPGWTE ADRMSLCYFA FPEEDAVIVG PASACRPEEL YRAFSYGEFR
301: EQVQADVKAT GSKVGLARFR LAAVTQS

Best Arabidopsis Sequence Match ( AT5G58660.1 )
(BLAST)

001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.