Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G58660.1 | Thale cress | cytosol, nucleus, peroxisome | 60.73 | 57.1 |
| VIT_06s0004g06790.t01 | Wine grape | cytosol | 42.9 | 42.14 |
| KRH30278 | Soybean | cytosol | 45.02 | 41.97 |
| KRG98268 | Soybean | cytosol | 44.41 | 41.41 |
| Solyc06g082030.2.1 | Tomato | cytosol | 41.99 | 39.38 |
| PGSC0003DMT400078051 | Potato | cytosol | 41.39 | 38.59 |
| GSMUA_Achr10P... | Banana | mitochondrion | 40.48 | 37.22 |
| Os04t0407800-01 | Rice | cytosol, nucleus, peroxisome | 32.93 | 32.44 |
| Zm00001d035994_P001 | Maize | cytosol | 32.63 | 32.14 |
| TraesCS3B01G603000.1 | Wheat | cytosol | 29.61 | 29.97 |
| OQU85872 | Sorghum | cytosol | 31.42 | 29.63 |
| HORVU3Hr1G117870.1 | Barley | cytosol | 28.7 | 29.5 |
| AT1G50960.1 | Thale cress | plastid | 28.7 | 28.27 |
| TraesCS3D01G542800.1 | Wheat | cytosol | 28.7 | 28.11 |
| AT4G21200.1 | Thale cress | cytosol, nucleus, peroxisome | 27.79 | 27.22 |
| TraesCS3A01G537300.2 | Wheat | cytosol, nucleus, peroxisome | 21.75 | 23.61 |
| AT4G23340.1 | Thale cress | cytosol, nucleus, peroxisome | 22.96 | 23.46 |
| AT5G51310.1 | Thale cress | cytosol, nucleus, peroxisome | 21.15 | 21.54 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | EntrezGene:823872 | ProteinID:AEE78253.1 | ArrayExpress:AT3G47190 | EnsemblPlantsGene:AT3G47190 |
| RefSeq:AT3G47190 | TAIR:AT3G47190 | RefSeq:AT3G47190-TAIR-G | EnsemblPlants:AT3G47190.1 | TAIR:AT3G47190.1 | Unigene:At.49646 |
| InterPro:DIOX_N | UniProt:F4JAD4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | RefSeq:NP_190303.2 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF206 | SUPFAM:SSF51197 | UniParc:UPI000034EFC8 | SEG:seg |
Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JAD4]
Coordinates
chr3:-:17374379..17376054
Molecular Weight (calculated)
37394.7 Da
IEP (calculated)
5.165
GRAVY (calculated)
-0.300
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNSESYPPE FRPLMSEKST ETGLDRSKDI DIPVIDMEHL DMEKLREACK DWGIFHLENT GIPLTFMSQV KEITESVLSL PFEEKRTLFG VNSPLSYYWG
101: THTVSPSGKA VTRAPQESSG HLFEGINIPL ASLSRLLALS CTDPKLESFR VVMEEYGKHV TRIIVTLFEA IIETLSLELS GDQKMGYLSE STGVIRVQRY
201: PQCTESPGLE AHTDSSVISI INQDDVGGLE FMKDGEWFNV KPLASSFVVG LGDMMQVISD EEYKSVLHKV GKRMRKKERY SIVNFVFPDK DCMFNSTRYK
301: PFKFSEFEAQ VKLDVETHGS KVGLSRFLSN P
101: THTVSPSGKA VTRAPQESSG HLFEGINIPL ASLSRLLALS CTDPKLESFR VVMEEYGKHV TRIIVTLFEA IIETLSLELS GDQKMGYLSE STGVIRVQRY
201: PQCTESPGLE AHTDSSVISI INQDDVGGLE FMKDGEWFNV KPLASSFVVG LGDMMQVISD EEYKSVLHKV GKRMRKKERY SIVNFVFPDK DCMFNSTRYK
301: PFKFSEFEAQ VKLDVETHGS KVGLSRFLSN P
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.