Factsheet for Os04t0407800-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035994_P001	Maize	cytosol	55.95	55.95
OQU85872	Sorghum	cytosol	56.85	54.42
CDX80345	Canola	cytosol, nucleus, peroxisome	19.05	50.39
Bra002628.1-P	Field mustard	cytosol, nucleus, peroxisome	18.75	49.61
TraesCS3B01G603000.1	Wheat	cytosol	48.21	49.54
CDY52119	Canola	cytosol, nucleus, peroxisome	18.15	48.03
HORVU3Hr1G117870.1	Barley	cytosol	45.83	47.83
CDY32695	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	28.87	47.55
TraesCS3D01G542800.1	Wheat	cytosol	47.62	47.34
VIT_06s0004g06790.t01	Wine grape	cytosol	41.07	40.95
GSMUA_Achr10P...	Banana	mitochondrion	43.75	40.83
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	36.01	39.67
KRG98268	Soybean	cytosol	41.37	39.15
KRH30278	Soybean	cytosol	40.77	38.59
Bra020362.1-P	Field mustard	cytosol	38.69	37.36
AT5G58660.1	Thale cress	cytosol, nucleus, peroxisome	38.99	37.22
CDY02826	Canola	cytosol	38.99	34.56
PGSC0003DMT400078051	Potato	cytosol	36.01	34.08
Solyc06g082030.2.1	Tomato	cytosol	35.71	33.99
AT3G47190.1	Thale cress	cytosol	32.44	32.93
Os04t0522500-01	Rice	cytosol	30.95	29.05
Os07t0103500-01	Rice	cytosol	29.46	29.03
Os02t0630300-01	Rice	cytosol	24.4	27.42

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	UniProt:A3ATL0	ProteinID:BAS89091.1	InterPro:DIOX_N	ProteinID:EAZ30649.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlantsGene:Os04g0407800
EnsemblPlants:Os04t0407800-01	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF206	SUPFAM:SSF51197	UniParc:UPI0000F18EB8	SEG:seg	:	:

Description

Similar to H0321H01.3 protein. (Os04t0407800-01)

Coordinates

chr4:+:20200632..20201883

Molecular Weight (calculated)

36739.9 Da

IEP (calculated)

6.315

GRAVY (calculated)

-0.244

Length

336 amino acids

Sequence
(BLAST)

001: MDPSCPPFPQ PEAPPLPLQL QLQPGLPRLE LPTLDLERVG GEDRAALVAA CRDLGAFRVV NHGVPGELRR RLLELGKQLL GRDTFELKKA RPGYFWGTAA
101: LKSLRVKEVN WLEGLHVDLV PGSSSSSSQV GDGDDDDDDG WMRIRALMAE YGDHMARIAR KLFDALAAEL GLDHHQAASY LAERQGFLRL YRYPPCPSSA
201: SCLGMEPHTD SSVLSIILGQ DHVGGLQVIR DGAWRDVAPA PGELLVNLGD MMTAISGGSY QSVRHRVLAS RPSTERVSCC YFAFPQEDAV VEAPSGIGGG
301: VYRPFSYREF REQVQADIKA VGTKVGLSRF YATATR

Best Arabidopsis Sequence Match ( AT5G58660.1 )
(BLAST)

001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.