Factsheet for TraesCS2A01G379000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G375300.1	Wheat	cytosol	95.87	96.67
TraesCS2B01G396000.1	Wheat	cytosol	95.87	95.87
Os04t0522500-01	Rice	cytosol	81.54	82.68
TraesCS4A01G033200.1	Wheat	cytosol, nucleus, peroxisome	78.51	77.66
TraesCS5A01G543100.1	Wheat	cytosol	75.21	76.47
KXG26736	Sorghum	cytosol, peroxisome, plastid	75.48	74.05
Zm00001d002999_P001	Maize	cytosol, peroxisome, plastid	73.28	73.48
TraesCS6A01G221900.1	Wheat	cytosol	68.04	71.18
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	59.23	62.5
KRH29245	Soybean	cytosol	53.72	57.69
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	56.47	56.47
PGSC0003DMT400068810	Potato	cytosol	50.96	55.56
HORVU2Hr1G090030.4	Barley	peroxisome	54.82	55.43
Solyc04g008670.1.1	Tomato	golgi	50.41	51.26
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	52.89	47.41
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	19.56	23.28

Protein Annotations

EnsemblPlants:TraesCS2A01G379000.1	EnsemblPlantsGene:TraesCS2A01G379000	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF177	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr2A:+:621920598..621922601

Molecular Weight (calculated)

39993.7 Da

IEP (calculated)

6.851

GRAVY (calculated)

-0.263

Length

363 amino acids

Sequence
(BLAST)

001: MPAFAEPAID PPLADSYRAL LRTDQLRRGG IAPALSPAVP ESVAVLERDL PMIDLKRLTS GDAGERKACA DAMARAASEW GFFQVINHGV GRELLEEMRR
101: EQARLFRLPF DTKEKAGLLN GSYRWGNPTA TSLRHLSWSE AFHVPLASIS REDCDYGKLS SLRAVMQEVA DAMSRVADTV AAALAEDLGH DAWGGEPAFP
201: AGCDGTTCFL RLNRYPACPF APDTFGLVPH TDSDFLTILC QDQVGGLQLM KDSRWVAVKP RPDALIVNIG DLFQAWSNNR YKSVEHKVVA NAKAERLSVA
301: YFLCPSYDSL VGTCGEPSPY RPFTFGEYRR KVQDDVKRTG KKIGLPNFLK QSPVDAMNHS LCT

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.