Factsheet for TraesCS6A01G221900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	secretory
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G259200.1	Wheat	cytosol	98.56	98.56
TraesCS6D01G213100.1	Wheat	cytosol	98.27	98.27
Zm00001d017294_P001	Maize	cytosol	80.4	77.29
Os02t0630300-01	Rice	cytosol	63.98	74.25
KXG30679	Sorghum	cytosol	80.4	73.04
TraesCS2A01G379000.1	Wheat	cytosol	71.18	68.04
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	61.96	62.5
TraesCS5A01G543100.1	Wheat	cytosol	63.4	61.62
TraesCS4A01G033200.1	Wheat	cytosol, nucleus, peroxisome	63.69	60.22
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	61.96	59.23
KRH29245	Soybean	cytosol	57.06	58.58
PGSC0003DMT400068810	Potato	cytosol	55.33	57.66
Solyc04g008670.1.1	Tomato	golgi	54.47	52.94
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	57.06	48.89
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	20.75	23.61

Protein Annotations

EnsemblPlants:TraesCS6A01G221900.1	EnsemblPlantsGene:TraesCS6A01G221900	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF177	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr6A:+:413732630..413735160

Molecular Weight (calculated)

37688.8 Da

IEP (calculated)

6.047

GRAVY (calculated)

-0.171

Length

347 amino acids

Sequence
(BLAST)

001: MPAFAESTAE PPLADSYYAL LRGGNKADEC ASAPPPGCQA PPVSECELPM IDVGCLTACG GGTEERAACA AAIASAAAEW GFFQVVNHGV KQELLEAMRR
101: EQVRLFRLPF EAKATAGLLN DSYRWGSPTA TSPRQLSWSE AFHVPLAGIS GSPCSYGELT SIRDVTQEVA NAMSKLANTL ARVLASSLGH TAGQRFPEGC
201: DERTCFLRLN RYPPCPFSPD AFGLVPHTDS DFLTVLCQDQ VGGLQLMKGS QWVAVKPIPG ALIVNIGDLF QAWSNNRYKS VEHKVVTNAT TERYSVAYFL
301: CPSYDSPIGA CEEPSPYRTF TFGEYRRRVQ EDVKKMGKKI GLPNFLL

Best Arabidopsis Sequence Match ( AT1G50960.1 )
(BLAST)

001: MASQPPFKTN FCSIFGSSFP NSTSESNTNT STIQTSGIKL PVIDLSHLTS GEEVKRKRCV KQMVAAAKEW GFFQIVNHGI PKDVFEMMLL EEKKLFDQPF
101: SVKVRERFSD LSKNSYRWGN PSATSPAQYS VSEAFHIILS EVSRISDDRN NLRTIVETYV QEIARVAQMI CEILGKQVNV SSEYFENIFE LENSFLRLNK
201: YHPSVFGSEV FGLVPHTDTS FLTILSQDQI GGLELENNGQ WISVKPCLEA LTVNIGDMFQ ALSNGVYQSV RHRVISPANI ERMSIAFFVC PYLETEIDCF
301: GYPKKYRRFS FREYKEQSEH DVKETGDKVG LSRFLI

Arabidopsis Description

GA2OX7Gibberellin 2-beta-dioxygenase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6I4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.