CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038780.1-P	Field mustard	cytosol	98.22	98.22
CDX76423	Canola	cytosol, peroxisome, plastid	51.48	94.57
CDY47108	Canola	cytosol, peroxisome, plastid	51.48	94.57
CDX79045	Canola	cytosol, nucleus, peroxisome	90.83	90.83
AT4G21200.1	Thale cress	cytosol, nucleus, peroxisome	90.53	90.53
CDX82811	Canola	cytosol, nucleus, peroxisome	89.64	89.64
CDY71106	Canola	cytosol	40.83	84.15
CDY47111	Canola	cytosol	39.94	83.33
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	52.66	54.6
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	50.59	49.28
CDY52119	Canola	cytosol, nucleus, peroxisome	17.16	45.67
CDX80345	Canola	cytosol, nucleus, peroxisome	16.57	44.09
CDY35579	Canola	cytosol, nucleus, peroxisome	31.95	43.37
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	52.96	42.82
CDY32695	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	22.19	36.76
CDY10932	Canola	cytosol, nucleus, peroxisome	28.99	30.15
CDX94181	Canola	cytosol, nucleus, peroxisome	28.99	30.15
CDY02826	Canola	cytosol	31.07	27.7
CDY56648	Canola	cytosol, nucleus, peroxisome	25.74	27.02
CDY35580	Canola	plastid	5.03	26.56
CDX91575	Canola	cytosol, nucleus, peroxisome	25.15	26.4
CDY29619	Canola	plastid	39.05	17.96

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	GO:A0A078E047	EnsemblPlants:CDX94029	ProteinID:CDX94029	ProteinID:CDX94029.1
ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00156913001	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF386	SUPFAM:SSF51197	UniParc:UPI0004EE4C95	:	:

Description

BnaC07g36630D

Coordinates

chrLK031879:+:182584..185370

Molecular Weight (calculated)

39215.8 Da

IEP (calculated)

7.361

GRAVY (calculated)

-0.449

Length

338 amino acids

Sequence
(BLAST)

001: MDPPFNEIYK NLLFKQITNT ENNVPQIPFS FSITAVVEEV ELPVIDVSRL IDGAEKEREI CKEEIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSER FSAGSYRWGT PSATCLRQLS WSEAFHVPMT DISDNKDFTT LRSTMEKFAS ESEALAYTLA EVLAEKSGRK SNFFKEKCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPRAL IINIGDLFQA WSNGMYKSVE HRVMTNPTVE RFSTAYFLCP SYDAVIECSG
301: DCPTYRNFSF REFRQQVQED VKKLGYKVGL PRFVNHLY

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.