Factsheet for PGSC0003DMT400005250

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g080120.1.1	Tomato	cytosol, mitochondrion, nucleus, peroxisome	94.43	89.21
PGSC0003DMT400029280	Potato	cytosol	71.31	75.96
VIT_10s0116g00410.t01	Wine grape	cytosol, nucleus, peroxisome	67.41	70.35
PGSC0003DMT400068810	Potato	cytosol	52.09	56.16
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	48.19	53.07
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	45.96	47.55
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	47.63	40.91
PGSC0003DMT400078051	Potato	cytosol	31.48	31.83
PGSC0003DMT400000488	Potato	cytosol	25.91	28.97
PGSC0003DMT400040854	Potato	cytosol, plastid	25.63	28.93

Protein Annotations

EntrezGene:102582860	Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0ZPN3	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	EnsemblPlantsGene:PGSC0003DMG400002068	PGSC:PGSC0003DMG400002068	EnsemblPlants:PGSC0003DMT400005250	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF386	SUPFAM:SSF51197	UniParc:UPI000296BCD5	RefSeq:XP_006348073.1	:	:

Description

Gibberellin 2-oxidase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400002068]

Coordinates

chr2:+:35972528..35977098

Molecular Weight (calculated)

41888.1 Da

IEP (calculated)

8.537

GRAVY (calculated)

-0.519

Length

359 amino acids

Sequence
(BLAST)

001: MVKSTNFSQQ ANQKIIRREE ESADPPFEET YKKLFDEIRI GKATSKMRNY ENLFVVEECE LPLIDLELLK GREFEREECK RKIAQASQEW GFFQVVNHGI
101: SQDVLLKMRK EQMKLFKKPF HEKMNDKQLN FSAGSYRWGT PSATCLQQLS WSEAFHVPLT DISNSIHHPT TLSSTMEQFA TTVSELAHNL ARILSERMGY
201: KSKYFRETCL PHTCYVRMNR YPACPISPQV FGLMPHTDSD FLTILHQDEI GGLQLVRDGK WISVKPNPEA LIINIGDLFQ AWSNGVYKSV EHRVVTNKAK
301: ERFSTAFFLC PSYDTEIRSC FEPSVYKRFT FREFRQQVQE DVKKYGYKVG LPRFLVSTH

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.