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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • plastid 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G139300.1 Wheat plastid 99.43 99.43
TraesCS1A01G139700.1 Wheat plastid 98.85 98.85
EER91566 Sorghum nucleus 77.59 79.41
Os10t0440100-00 Rice nucleus 78.74 79.19
KXG21054 Sorghum nucleus 56.61 68.17
GSMUA_Achr1P00430_001 Banana nucleus 63.79 64.16
TraesCS4B01G268800.1 Wheat nucleus 69.83 64.12
EES08854 Sorghum nucleus 60.92 63.47
Zm00001d014132_P001 Maize nucleus 34.48 55.81
GSMUA_Achr5P12510_001 Banana nucleus 38.22 54.51
TraesCS3B01G302900.1 Wheat nucleus, plastid 27.3 36.4
Protein Annotations
Gene3D:1.10.10.10Gene3D:1.20.140.80MapMan:13.1.2.3MapMan:15.5.10ncoils:CoilInterPro:E2F-DP_heterodim
InterPro:E2F_WHTH_DNA-bd_domGO:GO:0003674GO:GO:0003700GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005667GO:GO:0006139GO:GO:0006355GO:GO:0007049GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987InterPro:IPR036388InterPro:IPR038168PFAM:PF02319PFAM:PF08781
PIRSF:PIRSF009404PANTHER:PTHR12548PANTHER:PTHR12548:SF15SMART:SM01138SMART:SM01372SUPFAM:SSF144074
SUPFAM:SSF46785InterPro:TF_DP_C_sfEnsemblPlantsGene:TraesCS1B01G156900EnsemblPlants:TraesCS1B01G156900.1InterPro:Transc_factor_DP_CInterPro:Transcrpt_fac_DP
InterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sfTIGR:cd14458SEG:seg::
Description
No Description!
Coordinates
chr1B:+:265292541..265298840
Molecular Weight (calculated)
37115.6 Da
IEP (calculated)
8.218
GRAVY (calculated)
-0.552
Length
348 amino acids
Sequence
(BLAST)
001: MVSSARSSGG MAHSASNSAG SAGSPSGGIG PGKGVAAAAA TTSASASTPA SGSTVARRLN DLEIQGDDAP SSQPAASKKK KKGTRVVGPD KGNRGLRQFS
101: MKVCEKVEGK GRTTYNEVAD ELVAEFADPN SNIGSPDPDN PNTQQYDEKN IRRRVYDALN VLMAMDIISK DKKEIQWKGL PRTSLSDIDK LKTEVIGLKG
201: RIDKKSAYLQ ELQDQYVGLQ NLVERNEQLY GSGDAPSGGV ALPFILVQTR PHATVEVEIS EDMQLVHFDF NSTPFELHDD SFVLKAMGFS GKEETDGTVA
301: LVANAVECSS ASNVYGHRSP QPARPNGIRL RTSPPIPGIL KGRVKHEH
Best Arabidopsis Sequence Match ( AT5G03415.1 )
(BLAST)
001: MTTTGSNSNH NHHESNNNNN NPSTRSWGTA VSGQSVSTSG SMGSPSSRSE QTITVVTSTS DTTFQRLNNL DIQGDDAGSQ GASGVKKKKR GQRAAGPDKT
101: GRGLRQFSMK VCEKVESKGR TTYNEVADEL VAEFALPNND GTSPDQQQYD EKNIRRRVYD ALNVLMAMDI ISKDKKEIQW RGLPRTSLSD IEELKNERLS
201: LRNRIEKKTA YSQELEEQYV GLQNLIQRNE HLYSSGNAPS GGVALPFILV QTRPHATVEV EISEDMQLVH FDFNSTPFEL HDDNFVLKTM KFCDQPPQQP
301: NGRNNSQLVC HNFTPENPNK GPSTGPTPQL DMYETHLQSQ QHQQHSQLQI IPMPETNNVT SSADTAPVKS PSLPGIMNSS MKPEN
Arabidopsis Description
DPBTranscription factor-like protein DPB [Source:UniProtKB/Swiss-Prot;Acc:Q9FNY2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.