CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91566	Sorghum	nucleus	74.74	63.53
Os10t0440100-00	Rice	nucleus	70.24	58.67
EES08854	Sorghum	nucleus	67.13	58.08
TraesCS1A01G139700.1	Wheat	plastid	68.17	56.61
TraesCS1B01G156900.1	Wheat	plastid	68.17	56.61
TraesCS1D01G139300.1	Wheat	plastid	68.17	56.61
GSMUA_Achr1P00430_001	Banana	nucleus	59.86	50.0
EER95490	Sorghum	nucleus	65.4	48.21
Zm00001d014132_P001	Maize	nucleus	35.29	47.44
GSMUA_Achr5P12510_001	Banana	nucleus	37.02	43.85
OQU87325	Sorghum	plastid	32.18	31.21

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.20.140.80	MapMan:13.1.2.3	MapMan:15.5.10	UniProt:A0A1B6P5Y2	ncoils:Coil
InterPro:E2F-DP_heterodim	InterPro:E2F_WHTH_DNA-bd_dom	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005667
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR036388	InterPro:IPR038168	EnsemblPlants:KXG21054	ProteinID:KXG21054
ProteinID:KXG21054.1	PFAM:PF02319	PFAM:PF08781	PIRSF:PIRSF009404	PANTHER:PTHR12548	PANTHER:PTHR12548:SF15
SMART:SM01138	SMART:SM01372	EnsemblPlantsGene:SORBI_3009G008000	SUPFAM:SSF144074	SUPFAM:SSF46785	InterPro:TF_DP_C_sf
InterPro:Transc_factor_DP_C	InterPro:Transcrpt_fac_DP	UniParc:UPI00081ADE87	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:753550..760025

Molecular Weight (calculated)

31658.2 Da

IEP (calculated)

8.064

GRAVY (calculated)

-0.779

Length

289 amino acids

Sequence
(BLAST)

001: MMFSAPTRGG GGGSPSDRGC TAPSTPGNER TVARCLNGLD IQGDDTPSSQ PAAASNKKKR GAQAVGPDKN GRGLRQLSMR VREIVESKGR TTCNEVADEL
101: VADFSNLNIN IDSPDPDNPC PQQHDEKNIR RRVYDALNVL IATEIISKDK KEIQWRGLPR TNRGHGLKAR INKKNAYLQD LQEQYACLQN LVRQNKQLHG
201: SGDAPSGQLD LPFLLVQTRP HATVEVEMSE DMQLLHFDFN STPFELHDDS DVLKAMGLSG KIRKADCTQA PVVNGGECST STPNRDKRS

Best Arabidopsis Sequence Match ( AT5G03415.1 )
(BLAST)

001: MTTTGSNSNH NHHESNNNNN NPSTRSWGTA VSGQSVSTSG SMGSPSSRSE QTITVVTSTS DTTFQRLNNL DIQGDDAGSQ GASGVKKKKR GQRAAGPDKT
101: GRGLRQFSMK VCEKVESKGR TTYNEVADEL VAEFALPNND GTSPDQQQYD EKNIRRRVYD ALNVLMAMDI ISKDKKEIQW RGLPRTSLSD IEELKNERLS
201: LRNRIEKKTA YSQELEEQYV GLQNLIQRNE HLYSSGNAPS GGVALPFILV QTRPHATVEV EISEDMQLVH FDFNSTPFEL HDDNFVLKTM KFCDQPPQQP
301: NGRNNSQLVC HNFTPENPNK GPSTGPTPQL DMYETHLQSQ QHQQHSQLQI IPMPETNNVT SSADTAPVKS PSLPGIMNSS MKPEN

Arabidopsis Description

DPBTranscription factor-like protein DPB [Source:UniProtKB/Swiss-Prot;Acc:Q9FNY2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.